RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 GALNT9Q9HCQ5 603 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 ADARB2Q9NS39 739 aaKnown RBP4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 TMEM74BQ9NUR3 256 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 TMEM140Q9NV12 185 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 TESQ9UGI8 421 aaKnown RBP4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 TNFRSF18Q9Y5U5 241 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 TLDC2A0PJX2 215 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 ELANEP08246 267 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 GCSHP23434 173 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 HSD3B2P26439 372 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 MCAMP43121 646 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 OCA2Q04671 838 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 PPP3CAQ08209 521 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 STAT4Q14765 748 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 UBXN2BQ14CS0 331 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 NOMO1Q15155 1222 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 TOR2AQ5JU69 321 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 B3GNTL1Q67FW5 361 aaPredicted RBP4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 FBXO42Q6P3S6 717 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 FOXR2Q6PJQ5 311 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 GPR149Q86SP6 731 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 CMIPQ8IY22 773 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 SLC44A3Q8N4M1 653 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 AFAP1L2Q8N4X5 818 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 SIMC1Q8NDZ2 872 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 FBXO18Q8NFZ0 1043 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 NTN5Q8WTR8 489 aaPredicted RBP4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 AHCYL2Q96HN2 611 aaKnown RBP4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 TBCCD1Q9NVR7 557 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 DNAJC28Q9NX36 388 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 KCNE5Q9UJ90 142 aa4.08□□□□□ -1.76
RNU4-49P-201ENST00000516080 SPATA31A6Q5VVP1 1343 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 FAM171A2A8MVW0 826 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 ALAS1P13196 640 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 GSPT1P15170 499 aaKnown RBP4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 CXADRP78310 365 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 SRSF2Q01130 221 aaKnown RBP4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 MGAT2Q10469 447 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 SCAPQ12770 1279 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 ZNF529Q6P280 563 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 SEM1Q6ZVN7 128 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 STON2Q8WXE9 905 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 RNF31Q96EP0 1072 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 Q96MF0 132 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 ZSWIM1Q9BR11 485 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 DUSP26Q9BV47 211 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 R3HDMLQ9H3Y0 253 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 VTA1Q9NP79 307 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 DMRT3Q9NQL9 472 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 C14orf119Q9NWQ9 140 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 AJAP1Q9UKB5 411 aaPredicted RBP4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 TLK1Q9UKI8 766 aa4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 COL11A2P13942 1736 aaPredicted RBP4.07□□□□□ -1.76
RNU4-49P-201ENST00000516080 WNT10BO00744 389 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 GPANK1O95872 356 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 CKBP12277 381 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 FGFR4P22455 802 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 LMO1P25800 156 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 GPR3P46089 330 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 ALDH1A3P47895 512 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 MASP1P48740 699 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 TMPRSS15P98073 1019 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 ZNF169Q14929 603 aaPredicted RBP4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 Q6ZNX1 250 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 PRDM13Q9H4Q3 707 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 LDAHQ9H6V9 325 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 MANSC1Q9H8J5 431 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 RSAD1Q9HA92 442 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 CASS4Q9NQ75 786 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 DMTF1Q9Y222 760 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 SIK3Q9Y2K2 1263 aa4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 TMA7Q9Y2S6 64 aaKnown RBP4.06□□□□□ -1.76
RNU4-49P-201ENST00000516080 MYADML2A6NDP7 307 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 GPR32O75388 356 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 CLSTN1O94985 981 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 EYA4O95677 639 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 PLA2G5P39877 138 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 IL12RB1P42701 662 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 MTNR1BP49286 362 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 HSD11B2P80365 405 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 MRPS35P82673 323 aaKnown RBP4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 ATP2B3Q16720 1220 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 COLEC12Q5KU26 742 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 COLGALT2Q8IYK4 626 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 BOLLQ8N9W6 283 aaKnown RBP4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 MED15Q96RN5 788 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 AIFM2Q9BRQ8 373 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 SPATA5L1Q9BVQ7 753 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 KIAA1586Q9HCI6 787 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 ALG13Q9NP73 1137 aaKnown RBP4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 CCM2LQ9NUG4 571 aaPredicted RBP4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 LRIT1Q9P2V4 623 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 SLC23A1Q9UHI7 598 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 MTO1Q9Y2Z2 717 aaKnown RBP4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 ACTL7AQ9Y615 435 aa4.05□□□□□ -1.76
RNU4-49P-201ENST00000516080 GPR39O43194 453 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 ERN1O75460 977 aaKnown RBP4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 C1RP00736 705 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 ZNF37AP17032 561 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms