RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	NLRP5	P59047	1200 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	PTGDR	Q13258	359 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	PPP2R5C	Q13362	524 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	CAPS	Q13938	189 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	MXD4	Q14582	209 aa	Predicted RBP	11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	ADCK5	Q3MIX3	580 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	XKR9	Q5GH70	373 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	PRSS36	Q5K4E3	855 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	PSAPL1	Q6NUJ1	521 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	MAP4K3	Q8IVH8	894 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	ASAP3	Q8TDY4	903 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	ASB16	Q96NS5	453 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	CORO1B	Q9BR76	489 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	AVEN	Q9NQS1	362 aa	Predicted RBP	11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	XPNPEP1	Q9NQW7	623 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	MTRR	Q9UBK8	725 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	DDX25	Q9UHL0	483 aa	Known RBP	11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	VAV3	Q9UKW4	847 aa		11.64	□□□□□ -0.55
CLDND1-231	ENST00000515620	ARID2	Q68CP9	1835 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	ZZEF1	O43149	2961 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	VWA8	A3KMH1	1905 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	WDR27	A2RRH5	827 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	PRRG1	O14668	218 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	ZBTB39	O15060	712 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	PAPSS2	O95340	614 aa	Predicted RBP	11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	ZNF806	P0C7X5	589 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	PTPN2	P17706	415 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	FGFR3	P22607	806 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	LRRC32	Q14392	662 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	RTL10	Q7L3V2	364 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	OTUD6A	Q7L8S5	288 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	SMARCD2	Q92925	531 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	SLC26A6	Q9BXS9	759 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	C22orf23	Q9BZE7	217 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	SMOC1	Q9H4F8	434 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	TRPV5	Q9NQA5	729 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	C2orf42	Q9NWW7	574 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	NID2	Q14112	1375 aa		11.63	□□□□□ -0.55
CLDND1-231	ENST00000515620	NCAN	O14594	1321 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	ASPM	Q8IZT6	3477 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	SLC38A8	A6NNN8	435 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	ZNF263	O14978	683 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	RECQL4	O94761	1208 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	EPN2	O95208	641 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	TH	P07101	528 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	SPINK2	P20155	84 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	IGFBP6	P24592	240 aa	Predicted RBP	11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	TKT	P29401	623 aa	Known RBP	11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	VIPR2	P41587	438 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	CCR2	P41597	374 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	SOX9	P48436	509 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	CYP4A11	Q02928	519 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	NAB2	Q15742	525 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	MOXD1	Q6UVY6	613 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	PDZD4	Q76G19	769 aa	Predicted RBP	11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	WDR5B	Q86VZ2	330 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	C4orf19	Q8IY42	314 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	RASEF	Q8IZ41	740 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	KDF1	Q8NAX2	398 aa	Predicted RBP	11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	DEPDC1B	Q8WUY9	529 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	ZSWIM3	Q96MP5	696 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	LSM14B	Q9BX40	385 aa	Known RBP	11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	RNF26	Q9BY78	433 aa	Predicted RBP	11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	CXCL16	Q9H2A7	254 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	RGL1	Q9NZL6	768 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	PCDHA4	Q9UN74	947 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620	GREB1	Q4ZG55	1949 aa		11.62	□□□□□ -0.55
CLDND1-231	ENST00000515620		A0A1B0GUA9	196 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	ARHGEF37	A1IGU5	675 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620		I3L4J1	428 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	ZNF197	O14709	1029 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	B3GAT3	O94766	335 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	CPA1	P15085	419 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	GLRA2	P23416	452 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	ELF1	P32519	619 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	NOVA1	P51513	510 aa	Known RBP	11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	KPNA1	P52294	538 aa	Predicted RBP	11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	ROR1	Q01973	937 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	POU5F1B	Q06416	359 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	SPIRE1	Q08AE8	756 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	FOXC1	Q12948	553 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	CTTN	Q14247	550 aa	Known RBP	11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	NTRK3	Q16288	839 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	INF2	Q27J81	1249 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	WDR44	Q5JSH3	913 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	ANKS3	Q6ZW76	656 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	KBTBD6	Q86V97	674 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	CSGALNACT1	Q8TDX6	532 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	BRF1	Q92994	677 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	DDX27	Q96GQ7	796 aa	Known RBP	11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	DYDC2	Q96IM9	177 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	SH3GLB2	Q9NR46	395 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	SNTG2	Q9NY99	539 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	BACE2	Q9Y5Z0	518 aa		11.61	□□□□□ -0.55
CLDND1-231	ENST00000515620	LRRIQ4	A6NIV6	560 aa		11.6	□□□□□ -0.55
CLDND1-231	ENST00000515620	ARNTL	O00327	626 aa		11.6	□□□□□ -0.55
CLDND1-231	ENST00000515620	GIPC1	O14908	333 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms