RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 SHC3Q92529 594 aa13.77□□□□□ -0.2
PHF3-212ENST00000515594 ACCSQ96QU6 501 aa13.77□□□□□ -0.2
PHF3-212ENST00000515594 TAOK3Q9H2K8 898 aa13.77□□□□□ -0.2
PHF3-212ENST00000515594 HOMER3Q9NSC5 361 aa13.77□□□□□ -0.2
PHF3-212ENST00000515594 GSTTP1A0A1W2PQM5 241 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 TTC4O95801 387 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 CYP1A2P05177 515 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 HADHBP55084 474 aaKnown RBP13.77□□□□□ -0.21
PHF3-212ENST00000515594 TAS2R40P59535 323 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 ZNF568Q3ZCX4 644 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 SPDYCQ5MJ68 293 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 RHBDF2Q6PJF5 856 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 BTNL9Q6UXG8 535 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 SLC9A9Q8IVB4 645 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 MIEF2Q96C03 454 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 ZNF570Q96NI8 536 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 ANAPC5Q9UJX4 755 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 LRRC37AA6NMS7 1700 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 POC1B-GALNT4F8VUJ3 575 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 MYCLP12524 364 aaPredicted RBP13.77□□□□□ -0.21
PHF3-212ENST00000515594 CHRNA5P30532 468 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 ZFYVE27Q5T4F4 411 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
PHF3-212ENST00000515594 ECHDC2Q86YB7 292 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 C11orf70Q9BRQ4 267 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 FAM167BQ9BTA0 163 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 FHDC1Q9C0D6 1143 aaPredicted RBP13.77□□□□□ -0.21
PHF3-212ENST00000515594 NSRP1Q9H0G5 558 aaKnown RBP13.77□□□□□ -0.21
PHF3-212ENST00000515594 PARP2Q9UGN5 583 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 GTF3C4Q9UKN8 822 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 CEP83Q9Y592 693 aa13.77□□□□□ -0.21
PHF3-212ENST00000515594 DHX15O43143 795 aaKnown RBP13.76□□□□□ -0.21
PHF3-212ENST00000515594 PLS3P13797 630 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 ATF2P15336 505 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 YWHABP31946 246 aaKnown RBP13.76□□□□□ -0.21
PHF3-212ENST00000515594 COPS2P61201 443 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 CDR2Q01850 454 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 B3GNT9Q6UX72 402 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 MXRA8Q9BRK3 442 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 LRRC19Q9H756 370 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 GOLGA8SH3BPF8 625 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 GOLGA8MH3BSY2 632 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 C21orf2O43822 256 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 MMP10P09238 476 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
PHF3-212ENST00000515594 CNGA1P29973 690 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 WDR4P57081 412 aaKnown RBP13.76□□□□□ -0.21
PHF3-212ENST00000515594 MRPS9P82933 396 aaKnown RBP13.76□□□□□ -0.21
PHF3-212ENST00000515594 XKR9Q5GH70 373 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 MFSD5Q6N075 450 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 SLC39A4Q6P5W5 647 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 PARD3BQ8TEW8 1205 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 SNF8Q96H20 258 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 CCDC134Q9H6E4 229 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 GRID1Q9ULK0 1009 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
PHF3-212ENST00000515594 DENND3A2RUS2 1198 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 KLRG2A4D1S0 409 aaPredicted RBP13.75□□□□□ -0.21
PHF3-212ENST00000515594 FSCN2O14926 492 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 SUN1O94901 812 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 MYBL1P10243 752 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 HSPA6P17066 643 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 SLC8A1P32418 973 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 ZNF449Q6P9G9 518 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 CYFIP1Q7L576 1253 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 FAM213AQ9BRX8 229 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 DCLK3Q9C098 648 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 TMEM39BQ9GZU3 492 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 ATP6V0A4Q9HBG4 840 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 CCPG1Q9ULG6 757 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
PHF3-212ENST00000515594 ADGRA3Q8IWK6 1321 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 RASA4BC9J798 803 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 RASA4O43374 803 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 MFAP3P55082 362 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 GAD2Q05329 585 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 BNIP1Q12981 228 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 SEZ6Q53EL9 994 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 CKAP2Q8WWK9 683 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 P3H4Q92791 437 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 UTP4Q969X6 686 aaKnown RBP13.75□□□□□ -0.21
PHF3-212ENST00000515594 ETNK1Q9HBU6 452 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 NKX1-2Q9UD57 310 aaPredicted RBP13.75□□□□□ -0.21
PHF3-212ENST00000515594 ASTN2O75129 1339 aaPredicted RBP13.75□□□□□ -0.21
PHF3-212ENST00000515594 UBE4BO95155 1302 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 GZMAP12544 262 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 GALNTL6Q49A17 601 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 IZUMO3Q5VZ72 239 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 ACAD10Q6JQN1 1059 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 GSTA5Q7RTV2 222 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 PODNQ7Z5L7 613 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
PHF3-212ENST00000515594 TMEM109Q9BVC6 243 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 RAB20Q9NX57 234 aa13.75□□□□□ -0.21
PHF3-212ENST00000515594 ZMYND8Q9ULU4 1186 aaPredicted RBP13.75□□□□□ -0.21
PHF3-212ENST00000515594 WDR91A4D1P6 747 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 P4HBP07237 508 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms