RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 NLGN4YQ8NFZ3 816 aaPredicted RBP6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 KAT5Q92993 513 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 MYOCQ99972 504 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 C11orf54Q9H0W9 315 aaPredicted RBP6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 TCF7L1Q9HCS4 588 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 MAN1C1Q9NR34 630 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 SLC2A4RGQ9NR83 387 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 SLC23A1Q9UHI7 598 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 USP15Q9Y4E8 981 aaPredicted RBP6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 TCRBV7S2A1N4TA0A589 114 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 GRXCR1A8MXD5 290 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 KIAA0391O15091 583 aaKnown RBP6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 PPFIA4O75335 1185 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 RPS6KA4O75676 772 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 PF4V1P10720 104 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 EPHB1P54762 984 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 SLC25A3Q00325 362 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 MCL1Q07820 350 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 TARDBPQ13148 414 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 RAB39AQ14964 217 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 SYNE4Q8N205 404 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 HAS1Q92839 578 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 SLC46A2Q9BY10 475 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 ATP11BQ9Y2G3 1177 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 PCDHB1Q9Y5F3 818 aa6.27□□□□□ -1.41
SMARCA5-203ENST00000515531 RNASET2O00584 256 aaKnown RBP6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 S100BP04271 92 aaPredicted RBP6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 MTHFD1P11586 935 aaKnown RBP6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 ZSCAN20P17040 1043 aaPredicted RBP6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 AKAP5P24588 427 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 PIN1Q13526 163 aaPredicted RBP6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 DACT2Q5SW24 774 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 THEMIS2Q5TEJ8 643 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 TSHZ3Q63HK5 1081 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 FITM2Q8N6M3 262 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 ZNF483Q8TF39 744 aaPredicted RBP6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 NUP88Q99567 741 aaPredicted RBP6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 GSTO2Q9H4Y5 243 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 NRDE2Q9H7Z3 1164 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 CALCOCO1Q9P1Z2 691 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 ZNF180Q9UJW8 692 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 HS3ST3A1Q9Y663 406 aa6.26□□□□□ -1.41
SMARCA5-203ENST00000515531 AHRRA9YTQ3 701 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 ZNF202O95125 648 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 FSHBP01225 129 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 ITGB1P05556 798 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 POU2F2P09086 479 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 LAG3P18627 525 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 MAKP20794 623 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 MCM7P33993 719 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 GDF5P43026 501 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 RAB27AP51159 221 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 PTTG1IPP53801 180 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 ZNF280AP59817 542 aaPredicted RBP6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 MXRA7P84157 204 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 PLEKHG6Q3KR16 790 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 FAM102AQ5T9C2 384 aaPredicted RBP6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 USP45Q70EL2 814 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 RHOT2Q8IXI1 618 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 IFI44Q8TCB0 444 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 ZNF768Q9H5H4 540 aaKnown RBP6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 MMRN2Q9H8L6 949 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 FBXO34Q9NWN3 711 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 POLHQ9Y253 713 aa6.25□□□□□ -1.41
SMARCA5-203ENST00000515531 GAGE12BA1L429 117 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 GAGE12HA6NDE8 117 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 ZNF185O15231 689 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 AKAP10O43572 662 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 ABLIM3O94929 683 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 HLA-DOAP06340 250 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 SMARCA1P28370 1054 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 ABHD18Q0P651 414 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 KHDC1Q4VXA5 237 aaKnown RBP6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 PABPC1LQ4VXU2 614 aaKnown RBP6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 TIGD2Q4W5G0 525 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 PDCD4Q53EL6 469 aaKnown RBP6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 AGAP9Q5VTM2 703 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 C3orf20Q8ND61 904 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 NSUN6Q8TEA1 469 aaKnown RBP6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 JPH3Q8WXH2 748 aaPredicted RBP6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 MRGPRX4Q96LA9 322 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 VRK1Q99986 396 aaPredicted RBP6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 AKIP1Q9NQ31 210 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 FZD1Q9UP38 647 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 CHST2Q9Y4C5 530 aa6.24□□□□□ -1.41
SMARCA5-203ENST00000515531 CDHR4A6H8M9 788 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 GRM6O15303 877 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 PPM1GO15355 546 aaPredicted RBP6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 NARSO43776 548 aaKnown RBP6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 NCR1O76036 304 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 CKBP12277 381 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 SLC6A2P23975 617 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 FAM189BP81408 668 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 DSC2Q02487 901 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 TLE1Q04724 770 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 PGS1Q32NB8 556 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 CCDC157Q569K6 752 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 FNDC7Q5VTL7 733 aa6.23□□□□□ -1.41
SMARCA5-203ENST00000515531 METRNLQ641Q3 311 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms