RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 ITFG1Q8TB96 612 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 DDX27Q96GQ7 796 aaKnown RBP20.23■□□□□ 0.83
SPOP-220ENST00000515508 LLPHQ9BRT6 129 aaKnown RBP20.23■□□□□ 0.83
SPOP-220ENST00000515508 KCNH3Q9ULD8 1083 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 TNFSF13BQ9Y275 285 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 BACE2Q9Y5Z0 518 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 CDY1Q9Y6F8 540 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 R4GN57 208 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 CACNA1IQ9P0X4 2223 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 PHLPP2Q6ZVD8 1323 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 EIF5BO60841 1220 aaKnown RBP20.22■□□□□ 0.83
SPOP-220ENST00000515508 SP9P0CG40 484 aa20.22■□□□□ 0.83
SPOP-220ENST00000515508 TKTP29401 623 aaKnown RBP20.22■□□□□ 0.83
SPOP-220ENST00000515508 CCT6AP40227 531 aaKnown RBP20.22■□□□□ 0.83
SPOP-220ENST00000515508 PABPC1LQ4VXU2 614 aaKnown RBP20.22■□□□□ 0.83
SPOP-220ENST00000515508 XKR4Q5GH76 650 aa20.22■□□□□ 0.83
SPOP-220ENST00000515508 ZC3H14Q6PJT7 736 aaKnown RBP20.22■□□□□ 0.83
SPOP-220ENST00000515508 ANKS3Q6ZW76 656 aa20.22■□□□□ 0.83
SPOP-220ENST00000515508 APBB1IPQ7Z5R6 666 aaPredicted RBP20.22■□□□□ 0.83
SPOP-220ENST00000515508 C4orf32Q8N8J7 132 aa20.22■□□□□ 0.83
SPOP-220ENST00000515508 FBXO18Q8NFZ0 1043 aa20.22■□□□□ 0.83
SPOP-220ENST00000515508 GOLGA2P5Q9HBQ8 144 aa20.22■□□□□ 0.83
SPOP-220ENST00000515508 POLD4Q9HCU8 107 aa20.22■□□□□ 0.83
SPOP-220ENST00000515508 HCFC1R1Q9NWW0 138 aa20.22■□□□□ 0.83
SPOP-220ENST00000515508 DNMT3BQ9UBC3 853 aaKnown RBP20.22■□□□□ 0.83
SPOP-220ENST00000515508 CITO14578 2027 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 TRAPPC3O43617 180 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 GRM5P41594 1212 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 ID4P47928 161 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 PRKCQQ04759 706 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 CCDC83Q8IWF9 413 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 CEP120Q8N960 986 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 CDT1Q9H211 546 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 LRWD1Q9UFC0 647 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 LIMCH1Q9UPQ0 1083 aa20.21■□□□□ 0.83
SPOP-220ENST00000515508 PDCD11Q14690 1871 aaKnown RBP20.21■□□□□ 0.83
SPOP-220ENST00000515508 DNAH14Q0VDD8 3507 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 SMIM28A0A1B0GU29 152 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 KANSL1LA0AUZ9 987 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 K7ERI5 159 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 LRRN2O75325 713 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 SOX4Q06945 474 aaPredicted RBP20.2■□□□□ 0.82
SPOP-220ENST00000515508 SNW1Q13573 536 aaKnown RBP20.2■□□□□ 0.82
SPOP-220ENST00000515508 MLF2Q15773 248 aaPredicted RBP20.2■□□□□ 0.82
SPOP-220ENST00000515508 SLC8B1Q6J4K2 584 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 ALKAL1Q6UXT8 129 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 IGSF22Q8N9C0 903 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 ACO2Q99798 780 aaKnown RBP20.2■□□□□ 0.82
SPOP-220ENST00000515508 OSBPL6Q9BZF3 934 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 PTPRHQ9HD43 1115 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 AVENQ9NQS1 362 aaPredicted RBP20.2■□□□□ 0.82
SPOP-220ENST00000515508 TOPORSQ9NS56 1045 aaPredicted RBP20.2■□□□□ 0.82
SPOP-220ENST00000515508 DDX19AQ9NUU7 478 aaKnown RBP20.2■□□□□ 0.82
SPOP-220ENST00000515508 KIAA1024Q9UPX6 916 aa20.2■□□□□ 0.82
SPOP-220ENST00000515508 I3L4J1 428 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 NEFLP07196 543 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 BRCC3P46736 316 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 NPTX2P47972 431 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 HMGN5P82970 282 aaKnown RBP20.19■□□□□ 0.82
SPOP-220ENST00000515508 PFKPQ01813 784 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 ROR1Q01973 937 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 PDIA5Q14554 519 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 NBR1Q14596 966 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 MAML2Q8IZL2 1156 aaPredicted RBP20.19■□□□□ 0.82
SPOP-220ENST00000515508 DAW1Q8N136 415 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 KCNG4Q8TDN1 519 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 KXD1Q9BQD3 176 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 CCDC94Q9BW85 323 aaPredicted RBP20.19■□□□□ 0.82
SPOP-220ENST00000515508 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 SLC38A7Q9NVC3 462 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 ARHGAP28Q9P2N2 729 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 STK24Q9Y6E0 443 aa20.19■□□□□ 0.82
SPOP-220ENST00000515508 ARHGEF37A1IGU5 675 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 YARSP54577 528 aaKnown RBP20.18■□□□□ 0.82
SPOP-220ENST00000515508 PEX3P56589 373 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 SLC5A9Q2M3M2 681 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 ZNF568Q3ZCX4 644 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 SLC44A4Q53GD3 710 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 TAS1R3Q7RTX0 852 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 ZNF461Q8TAF7 563 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 SNX29Q8TEQ0 813 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 MRPL4Q9BYD3 311 aaKnown RBP20.18■□□□□ 0.82
SPOP-220ENST00000515508 GDE1Q9NZC3 331 aa20.18■□□□□ 0.82
SPOP-220ENST00000515508 NOL7Q9UMY1 257 aaKnown RBP20.18■□□□□ 0.82
SPOP-220ENST00000515508 MRPS23Q9Y3D9 190 aaKnown RBP20.18■□□□□ 0.82
SPOP-220ENST00000515508 COL4A2P08572 1712 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 ABLIM1O14639 778 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 SYN3O14994 580 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 TBC1D4O60343 1298 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 ECI2O75521 394 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 ABLIM3O94929 683 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 RHOP08100 348 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 KCNE1P15382 129 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 PROZP22891 400 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 U2AF2P26368 475 aaKnown RBP eCLIP20.17■□□□□ 0.824e-6■■■■□ 20.9
SPOP-220ENST00000515508 MAPK7Q13164 816 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 DMP1Q13316 513 aaPredicted RBP20.17■□□□□ 0.82
SPOP-220ENST00000515508 GNL2Q13823 731 aaKnown RBP20.17■□□□□ 0.82
SPOP-220ENST00000515508 ZNF528Q3MIS6 628 aa20.17■□□□□ 0.82
SPOP-220ENST00000515508 VARS2Q5ST30 1063 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms