RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 LACTBL1A8MY62 500 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 HNRNPDLO14979 420 aaKnown RBP12.55□□□□□ -0.4
VCAN-212ENST00000515397 CUTAO60888 179 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 PPP6R2O75170 966 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 RFPL2O75678 378 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 YEATS4O95619 227 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 BRD1O95696 1058 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 ME1P48163 572 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 CASP5P51878 434 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 GTF2BQ00403 316 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 CBX2Q14781 532 aaPredicted RBP12.55□□□□□ -0.4
VCAN-212ENST00000515397 UPP1Q16831 310 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 XKR4Q5GH76 650 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 DCLRE1AQ6PJP8 1040 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 ZNF720Q7Z2F6 126 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 GLIS3Q8NEA6 775 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 ZSWIM2Q8NEG5 633 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 CLSTN3Q9BQT9 956 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 TTPALQ9BTX7 342 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 PHF7Q9BWX1 381 aaPredicted RBP12.55□□□□□ -0.4
VCAN-212ENST00000515397 ADAM7Q9H2U9 754 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 POMKQ9H5K3 350 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 MRPL44Q9H9J2 332 aaKnown RBP12.55□□□□□ -0.4
VCAN-212ENST00000515397 RXFP1Q9HBX9 757 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 MAN1C1Q9NR34 630 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 TOPORSQ9NS56 1045 aaPredicted RBP12.55□□□□□ -0.4
VCAN-212ENST00000515397 PRKAG3Q9UGI9 489 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 TUBGCP4Q9UGJ1 667 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 MYH11P35749 1972 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 TRIP11Q15643 1979 aa12.55□□□□□ -0.4
VCAN-212ENST00000515397 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.4
VCAN-212ENST00000515397 H0YCG3 227 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 PODXLO00592 558 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
VCAN-212ENST00000515397 TGM5O43548 720 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 CLTAP09496 248 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 HOXB8P17481 243 aaPredicted RBP12.54□□□□□ -0.4
VCAN-212ENST00000515397 TKTP29401 623 aaKnown RBP12.54□□□□□ -0.4
VCAN-212ENST00000515397 ACOT2P49753 483 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 ENOX2Q16206 610 aaKnown RBP12.54□□□□□ -0.4
VCAN-212ENST00000515397 E2F4Q16254 413 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 CES5AQ6NT32 575 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 RSPO2Q6UXX9 243 aaPredicted RBP12.54□□□□□ -0.4
VCAN-212ENST00000515397 RNF135Q8IUD6 432 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 GRAMD1CQ8IYS0 662 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 LNX1Q8TBB1 728 aaPredicted RBP12.54□□□□□ -0.4
VCAN-212ENST00000515397 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 MSTO1Q9BUK6 570 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 CNTN3Q9P232 1028 aa12.54□□□□□ -0.4
VCAN-212ENST00000515397 MORC2Q9Y6X9 1032 aaPredicted RBP12.54□□□□□ -0.4
VCAN-212ENST00000515397 A0A0B4J269 797 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 CCDC195A0A1B0GUA6 201 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 LOC730098B7Z3J9 87 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 PI4K2BG5E9Z4 385 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 FAM189A1O60320 539 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
VCAN-212ENST00000515397 GCNT3O95395 438 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 GLUD1P00367 558 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 ADH1AP07327 375 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 KCNE1P15382 129 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 ADSSP30520 456 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 ADALQ6DHV7 355 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 PPFIBP1Q86W92 1011 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 MAP4K3Q8IVH8 894 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 ST13P5Q8NFI4 369 aaPredicted RBP12.53□□□□□ -0.4
VCAN-212ENST00000515397 NOC3LQ8WTT2 800 aaKnown RBP12.53□□□□□ -0.4
VCAN-212ENST00000515397 BLZF1Q9H2G9 400 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 RPF1Q9H9Y2 349 aaKnown RBP12.53□□□□□ -0.4
VCAN-212ENST00000515397 STK39Q9UEW8 545 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 RCOR1Q9UKL0 485 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 ZMYM2Q9UBW7 1377 aa12.53□□□□□ -0.4
VCAN-212ENST00000515397 TTC26A0AVF1 554 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 GOLGA8IPA6NC78 632 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 GOLGA8JA6NMD2 632 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 PPEF2O14830 753 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 OGTO15294 1046 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 PIGRP01833 764 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 FGFR3P22607 806 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 OR1D2P34982 312 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 AFMP43652 599 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 CDR1P51861 262 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 ARPP19P56211 112 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 PSMD5Q16401 504 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 ATAT1Q5SQI0 421 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 LILRA6Q6PI73 481 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 KCNG4Q8TDN1 519 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 SAAL1Q96ER3 474 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 POP1Q99575 1024 aaKnown RBP12.52□□□□□ -0.41
VCAN-212ENST00000515397 STRA6Q9BX79 667 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 PCIF1Q9H4Z3 704 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 C11orf16Q9NQ32 467 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 DZANK1Q9NVP4 752 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 CFAP45Q9UL16 551 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 SSX2IPQ9Y2D8 614 aa12.52□□□□□ -0.41
VCAN-212ENST00000515397 TIMM13Q9Y5L4 95 aaPredicted RBP12.52□□□□□ -0.41
VCAN-212ENST00000515397 A0A1B0GVL5 298 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms