RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 VIPR2P41587 438 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 CCR2P41597 374 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 NOVA1P51513 510 aaKnown RBP13.12□□□□□ -0.31
CSF1R-208ENST00000515239 SPIRE1Q08AE8 756 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
CSF1R-208ENST00000515239 FOXC1Q12948 553 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 AAMPQ13685 434 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 NAB2Q15742 525 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 KBTBD6Q86V97 674 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
CSF1R-208ENST00000515239 HACE1Q8IYU2 909 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 ETNPPLQ8TBG4 499 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 TCEANC2Q96MN5 208 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 CXCL16Q9H2A7 254 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
CSF1R-208ENST00000515239 MTRRQ9UBK8 725 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 PPME1Q9Y570 386 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 ZMYM2Q9UBW7 1377 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 SPAG17Q6Q759 2223 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 CYP3A7-CYP3A51PA0A087WV96 503 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 ZNF263O14978 683 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 ZBTB39O15060 712 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 B4GALT5O43286 388 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
CSF1R-208ENST00000515239 NPTXRO95502 500 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 CYP3A7P24462 503 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
CSF1R-208ENST00000515239 MBTD1Q05BQ5 628 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 POU5F1BQ06416 359 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 ELAVL2Q12926 359 aaKnown RBP13.11□□□□□ -0.31
CSF1R-208ENST00000515239 LRRC32Q14392 662 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 RNF43Q68DV7 783 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.11□□□□□ -0.31
CSF1R-208ENST00000515239 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 MFSD6LQ8IWD5 586 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 TBCKQ8TEA7 893 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 GAB3Q8WWW8 586 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 SMARCD2Q92925 531 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 CORO1BQ9BR76 489 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 NCANO14594 1321 aa13.11□□□□□ -0.31
CSF1R-208ENST00000515239 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 TAF4O00268 1085 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 PTGESO14684 152 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 MOSPD3O75425 235 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 ABLIM3O94929 683 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 TDP2O95551 362 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 MXD4Q14582 209 aaPredicted RBP13.1□□□□□ -0.31
CSF1R-208ENST00000515239 EMC2Q15006 297 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 DGKKQ5KSL6 1271 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 ZNF461Q8TAF7 563 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 DEPDC1BQ8WUY9 529 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 SCNM1Q9BWG6 230 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 TRPV4Q9HBA0 871 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 XPNPEP1Q9NQW7 623 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 PCDHGA5Q9Y5G8 931 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 WDFY3Q8IZQ1 3526 aa13.1□□□□□ -0.31
CSF1R-208ENST00000515239 ZNF197O14709 1029 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 EXTL3O43909 919 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 RPP40O75818 363 aaKnown RBP13.09□□□□□ -0.31
CSF1R-208ENST00000515239 LRG1P02750 347 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 THP07101 528 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 P4HBP07237 508 aaKnown RBP13.09□□□□□ -0.31
CSF1R-208ENST00000515239 MPLP40238 635 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 SOX9P48436 509 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 PXNP49023 591 aaPredicted RBP13.09□□□□□ -0.31
CSF1R-208ENST00000515239 RCAN1P53805 252 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 ZNF252P-AS1Q0IIN9 211 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 TCEAL6Q6IPX3 200 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 TXNDC11Q6PKC3 985 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 CD300LGQ6UXG3 332 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 DHX32Q7L7V1 743 aaKnown RBP13.09□□□□□ -0.31
CSF1R-208ENST00000515239 C4orf19Q8IY42 314 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 TCEAL3Q969E4 200 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 ZC3H10Q96K80 434 aaKnown RBP13.09□□□□□ -0.31
CSF1R-208ENST00000515239 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 AKAP13Q12802 2813 aa13.09□□□□□ -0.31
CSF1R-208ENST00000515239 DMXL2Q8TDJ6 3036 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 DSPP15924 2871 aaKnown RBP13.08□□□□□ -0.32
CSF1R-208ENST00000515239 CCDC163A0A0D9SF12 145 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 MYBPHLA2RUH7 354 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 C4orf47A7E2U8 309 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 TKTP29401 623 aaKnown RBP13.08□□□□□ -0.32
CSF1R-208ENST00000515239 YWHABP31946 246 aaKnown RBP13.08□□□□□ -0.32
CSF1R-208ENST00000515239 ROR1Q01973 937 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 PPP2R5CQ13362 524 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 XKR9Q5GH70 373 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 SH3PXD2AQ5TCZ1 1133 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 C1orf228Q6PIY5 440 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 TCEAL8Q8IYN2 117 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 HS6ST3Q8IZP7 471 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 ASAP3Q8TDY4 903 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 ZCCHC14Q8WYQ9 949 aaKnown RBP13.08□□□□□ -0.32
CSF1R-208ENST00000515239 RSPRY1Q96DX4 576 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms