RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ADORA2AP29274 412 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 TDRD10Q5VZ19 366 aaKnown RBP15.22■□□□□ 0.03
TRIO-222ENST00000515144 OSMRQ99650 979 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 EPAS1Q99814 870 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 SLC38A7Q9NVC3 462 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 PPP3CCP48454 512 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 EPC2Q52LR7 807 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 DHX40Q8IX18 779 aaKnown RBP15.22■□□□□ 0.03
TRIO-222ENST00000515144 GSPT2Q8IYD1 628 aaKnown RBP15.22■□□□□ 0.03
TRIO-222ENST00000515144 CCHCR1Q8TD31 782 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 MRFAP1L1Q96HT8 127 aa15.22■□□□□ 0.03
TRIO-222ENST00000515144 WNT10BO00744 389 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 GPR182O15218 404 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 MAP4P27816 1152 aaKnown RBP15.21■□□□□ 0.03
TRIO-222ENST00000515144 CYP26B1Q9NR63 512 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 NFIBO00712 420 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 TAC1P20366 129 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 KPNA2P52292 529 aaKnown RBP15.21■□□□□ 0.03
TRIO-222ENST00000515144 ARHGEF7Q14155 803 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 SHC4Q6S5L8 630 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 GAS2L3Q86XJ1 694 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 RBM41Q96IZ5 413 aaKnown RBP15.21■□□□□ 0.03
TRIO-222ENST00000515144 DPP3Q9NY33 737 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 HSPA4LO95757 839 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 RAP1GAPP47736 663 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 SOX10P56693 466 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 C3orf67Q6ZVT6 689 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 ANKMY2Q8IV38 441 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 VSTM4Q8IW00 320 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 TRIM59Q8IWR1 403 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 VPS39Q96JC1 886 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 PGLYRP2Q96PD5 576 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 RRN3P2A6NIE6 340 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 MAP3K13O43283 966 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 FAM133BQ5BKY9 247 aaKnown RBP15.21■□□□□ 0.03
TRIO-222ENST00000515144 LLGL2Q6P1M3 1020 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 CASS4Q9NQ75 786 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 GPR75-ASB3A0A0A6YYF3 556 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 APRTP07741 180 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 KLRC2P26717 231 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 CDC25BP30305 580 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 BEX3Q00994 111 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 SPDYAQ5MJ70 313 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 MAGEB5Q9BZ81 275 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 SNX24Q9Y343 169 aa15.21■□□□□ 0.03
TRIO-222ENST00000515144 TLR2O60603 784 aa15.21■□□□□ 0.02
TRIO-222ENST00000515144 PTGISQ16647 500 aa15.21■□□□□ 0.02
TRIO-222ENST00000515144 MOB2Q70IA6 237 aa15.21■□□□□ 0.02
TRIO-222ENST00000515144 PPM1NQ8N819 430 aa15.21■□□□□ 0.02
TRIO-222ENST00000515144 ELMO3Q96BJ8 720 aa15.21■□□□□ 0.02
TRIO-222ENST00000515144 CDC23Q9UJX2 597 aa15.21■□□□□ 0.02
TRIO-222ENST00000515144 SCP2P22307 547 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 EIF3EP60228 445 aaKnown RBP15.2■□□□□ 0.02
TRIO-222ENST00000515144 TMC7Q7Z402 723 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 LCA5Q86VQ0 697 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 CCNYL1Q8N7R7 359 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 TBKBP1A7MCY6 615 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 ATMINO43313 823 aaPredicted RBP15.2■□□□□ 0.02
TRIO-222ENST00000515144 CDC42EP1Q00587 391 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 TMEM259Q4ZIN3 620 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 ATPAF2Q8N5M1 289 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 ACSF2Q96CM8 615 aaPredicted RBP15.2■□□□□ 0.02
TRIO-222ENST00000515144 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 MYL4P12829 197 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 SESN2P58004 480 aaPredicted RBP15.2■□□□□ 0.02
TRIO-222ENST00000515144 SMAP1Q8IYB5 467 aaPredicted RBP15.2■□□□□ 0.02
TRIO-222ENST00000515144 CLMNQ96JQ2 1002 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 SPATC1LQ9H0A9 340 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 NYAP2Q9P242 653 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 IQANK1A0A1B0GTG1 560 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 ODC1P11926 461 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 BRD2P25440 801 aaKnown RBP15.2■□□□□ 0.02
TRIO-222ENST00000515144 PDIA6Q15084 440 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 APOL5Q9BWW9 433 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 LGALS16A8MUM7 142 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 STAG3L1P0CL83 205 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 CATSPER3Q86XQ3 398 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 HIPK4Q8NE63 616 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 PDGFDQ9GZP0 370 aaPredicted RBP15.2■□□□□ 0.02
TRIO-222ENST00000515144 AIPL1Q9NZN9 384 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 BCAP29Q9UHQ4 241 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 DEUP1Q05D60 604 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 CDH18Q13634 790 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 MS4A14Q96JA4 679 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 KRT82Q9NSB4 513 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 PCDHB12Q9Y5F1 795 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 SYNGAP1Q96PV0 1343 aa15.2■□□□□ 0.02
TRIO-222ENST00000515144 TMEM247A6NEH6 219 aa15.19■□□□□ 0.02
TRIO-222ENST00000515144 PBLDP30039 288 aaPredicted RBP15.19■□□□□ 0.02
TRIO-222ENST00000515144 FASTKD1Q53R41 847 aaKnown RBP15.19■□□□□ 0.02
TRIO-222ENST00000515144 LZICQ8WZA0 190 aa15.19■□□□□ 0.02
TRIO-222ENST00000515144 PKNOX2Q96KN3 472 aa15.19■□□□□ 0.02
TRIO-222ENST00000515144 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
TRIO-222ENST00000515144 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.19■□□□□ 0.029e-7■■■■■ 28.8
TRIO-222ENST00000515144 MFAP3LO75121 409 aa15.19■□□□□ 0.02
TRIO-222ENST00000515144 KRT7P08729 469 aa15.19■□□□□ 0.02
TRIO-222ENST00000515144 AKAP5P24588 427 aa15.19■□□□□ 0.02
TRIO-222ENST00000515144 SBK1Q52WX2 424 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms