RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 SMOC1Q9H4F8 434 aa9.36□□□□□ -0.91
TRIM6-211ENST00000515022 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
TRIM6-211ENST00000515022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRIM6-211ENST00000515022 C2orf42Q9NWW7 574 aa9.36□□□□□ -0.91
TRIM6-211ENST00000515022 FNIP2Q9P278 1114 aa9.36□□□□□ -0.91
TRIM6-211ENST00000515022 DNMT3BQ9UBC3 853 aaKnown RBP9.36□□□□□ -0.91
TRIM6-211ENST00000515022 NAP1L2Q9ULW6 460 aaPredicted RBP9.36□□□□□ -0.91
TRIM6-211ENST00000515022 COL4A3BPQ9Y5P4 624 aa9.36□□□□□ -0.91
TRIM6-211ENST00000515022 CYP46A1Q9Y6A2 500 aa9.36□□□□□ -0.91
TRIM6-211ENST00000515022 FLNBO75369 2602 aaKnown RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 NBEAQ8NFP9 2946 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 IGFBP6P24592 240 aaPredicted RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 JAK3P52333 1124 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 CDC42EP1Q00587 391 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 LAMTOR4Q0VGL1 99 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 PSMD5Q16401 504 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 ADCK5Q3MIX3 580 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 PABPC1LQ4VXU2 614 aaKnown RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 AXDND1Q5T1B0 1012 aaPredicted RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 FAM171A1Q5VUB5 890 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 ANO5Q75V66 913 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 CEP68Q76N32 757 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 RUFY3Q7L099 469 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 REXO1Q8N1G1 1221 aaKnown RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 FAM160A2Q8N612 972 aaPredicted RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 ARRDC1-AS1Q9H2J1 176 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 NXF3Q9H4D5 531 aaKnown RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 SLC24A3Q9HC58 644 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 RBM12Q9NTZ6 932 aaKnown RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 ADAM28Q9UKQ2 775 aa9.35□□□□□ -0.91
TRIM6-211ENST00000515022 MRPS17Q9Y2R5 130 aaKnown RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 MRPS23Q9Y3D9 190 aaKnown RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 GCN1Q92616 2671 aaKnown RBP9.35□□□□□ -0.91
TRIM6-211ENST00000515022 DMXL2Q8TDJ6 3036 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 PDCD11Q14690 1871 aaKnown RBP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 SMG1Q96Q15 3661 aaKnown RBP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 CASTOR2A6NHX0 329 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 GOLGA8AA7E2F4 631 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 GOLGA8BA8MQT2 603 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 TM4SF5O14894 197 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 GIPC1O14908 333 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 ZBTB43O43298 467 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 TSPAN1O60635 241 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 LRP3O75074 770 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 XYLBO75191 536 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 NR1I2O75469 434 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 ECI2O75521 394 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 TOP3BO95985 862 aaKnown RBP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 HNRNPA1P09651 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 CIITAP33076 1130 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 ADD1P35611 737 aaKnown RBP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 CXCL12P48061 93 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 NRLP54845 237 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 SHC2P98077 582 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 PFKFB3Q16875 520 aaPredicted RBP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 SWT1Q5T5J6 900 aaKnown RBP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 SGMS1Q86VZ5 419 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 GSTCDQ8NEC7 633 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 LNX1Q8TBB1 728 aaPredicted RBP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 TCEAL4Q96EI5 215 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 GLT8D2Q9H1C3 349 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 CXCL16Q9H2A7 254 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 BRD9Q9H8M2 597 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 C6orf50Q9HD87 102 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 RBM28Q9NW13 759 aaKnown RBP9.34□□□□□ -0.91
TRIM6-211ENST00000515022 LAMA5O15230 3695 aa9.34□□□□□ -0.91
TRIM6-211ENST00000515022 COL4A2P08572 1712 aa9.34□□□□□ -0.92
TRIM6-211ENST00000515022 TRIP11Q15643 1979 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 CACNA1EQ15878 2313 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 hCG_1984214I3L0E3 225 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 EML1O00423 815 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 RNF40O75150 1001 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 PSMD10O75832 226 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 ERLIN2O94905 339 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 KIF4AO95239 1232 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 KCNK5O95279 499 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 ZIC2O95409 532 aaPredicted RBP9.33□□□□□ -0.92
TRIM6-211ENST00000515022 NPTXRO95502 500 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 TDP2O95551 362 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 RHOP08100 348 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 RPS6KB1P23443 525 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 FCARP24071 287 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 SFNP31947 248 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 OR1D2P34982 312 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 SOX9P48436 509 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 RBM25P49756 843 aaKnown RBP9.33□□□□□ -0.92
TRIM6-211ENST00000515022 CCR3P51677 355 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 HSP90AA2PQ14568 343 aaPredicted RBP9.33□□□□□ -0.92
TRIM6-211ENST00000515022 FAM78AQ5JUQ0 283 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 STPG1Q5TH74 334 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 PSAPL1Q6NUJ1 521 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 UNQ6494/PRO21346Q6UXR6 183 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 THSD4Q6ZMP0 1018 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 Q6ZS52 159 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 SRGAP1Q7Z6B7 1085 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 FBXL16Q8N461 479 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 ZNF713Q8N859 430 aaPredicted RBP9.33□□□□□ -0.92
TRIM6-211ENST00000515022 RNF149Q8NC42 400 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 FAM3CQ92520 227 aa9.33□□□□□ -0.92
TRIM6-211ENST00000515022 RIT2Q99578 217 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms