RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 BMT2Q1RMZ1 405 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 DACT2Q5SW24 774 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 C1QL3Q5VWW1 255 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 MFSD5Q6N075 450 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 POLNQ7Z5Q5 900 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 CCDC146Q8IYE0 955 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 SH2D3CQ8N5H7 860 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 RNF169Q8NCN4 708 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 FAM156AQ8NDB6 213 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 OR52N2Q8NGI0 321 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 Q8TCH9 128 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 MPHOSPH9Q99550 1183 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 CPPED1Q9BRF8 314 aaPredicted RBP6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 NDC1Q9BTX1 674 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 ARMT1Q9H993 441 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 ARNT2Q9HBZ2 717 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 A0A088AWK7 358 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 TCRBV7S2A1N4TA0A589 114 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 FAM227AF5H4B4 570 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 CAND2O75155 1236 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 ZBED1O96006 694 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 SNRPA1P09661 255 aaKnown RBP6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 RHCEP18577 417 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 GNAT2P19087 354 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 CLRN1P58418 232 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 RHDQ02161 417 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 PTH1RQ03431 593 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 MAP9Q49MG5 647 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 ANO6Q4KMQ2 910 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 FLYWCH1Q4VC44 716 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 CCDC157Q569K6 752 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 ZNF529Q6P280 563 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 UBE3BQ7Z3V4 1068 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 DAAM2Q86T65 1068 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 FAM83AQ86UY5 434 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 ZNF808Q8N4W9 903 aaPredicted RBP6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 CELF5Q8N6W0 485 aaKnown RBP6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 MDGA1Q8NFP4 955 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 ST8SIA2Q92186 375 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 SLC35A4Q96G79 324 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 BDH2Q9BUT1 245 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 FAM204AQ9H8W3 233 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 CD248Q9HCU0 757 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 DDX21Q9NR30 783 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 PNPOQ9NVS9 261 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 SLC52A1Q9NWF4 448 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 FBXO34Q9NWN3 711 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 STAP2Q9UGK3 403 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 L1RE1Q9UN81 338 aa6.54□□□□□ -1.36
HMGCS1-207ENST00000514610 CCDC194A0A1B0GVG4 234 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 H3BUI4 141 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 KIAA0391O15091 583 aaKnown RBP6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 ARIH2O95376 493 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 HRGP04196 525 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 PRDX5P30044 214 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 RABGGTBP53611 331 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 HLTFQ14527 1009 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 CCSAPQ6IQ19 270 aaPredicted RBP6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 MAMDC4Q6UXC1 1216 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 KSR2Q6VAB6 950 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 SRGAP1Q7Z6B7 1085 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 PPP1R3BQ86XI6 285 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 FAM90A1Q86YD7 464 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 FAM43AQ8N2R8 423 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 SARGQ9BW04 601 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 BHMT2Q9H2M3 363 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 ATP6V0A4Q9HBG4 840 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 JAG2Q9Y219 1238 aa6.53□□□□□ -1.36
HMGCS1-207ENST00000514610 ZNF623O75123 536 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 KRT18P05783 430 aaKnown RBP6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 TRIM27P14373 513 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 HK1P19367 917 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 COMTP21964 271 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 SMARCA1P28370 1054 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 NFIXQ14938 502 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 PABPC1LQ4VXU2 614 aaKnown RBP6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 CCDC149Q6ZUS6 474 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 SYT12Q8IV01 421 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 IL17RDQ8NFM7 739 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 TFAP2CQ92754 450 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 FAM167AQ96KS9 214 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 WDCPQ9H6R7 721 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 ZMAT3Q9HA38 289 aaKnown RBP6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 SPON1Q9HCB6 807 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 MAN1C1Q9NR34 630 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 FEZ2Q9UHY8 353 aaPredicted RBP6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 HDAC5Q9UQL6 1122 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 PCDHA1Q9Y5I3 950 aa6.52□□□□□ -1.37
HMGCS1-207ENST00000514610 CAPN8A6NHC0 703 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 CAPN14A8MX76 684 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 PRR5-ARHGAP8B1AHC4 643 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 APAF1O14727 1248 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 IPO13O94829 963 aaKnown RBP6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 AHSGP02765 367 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 FTH1P19P0C7X4 201 aa6.51□□□□□ -1.37
HMGCS1-207ENST00000514610 ACO1P21399 889 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms