RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 PPP2R2CQ9Y2T4 447 aa21.31■■□□□ 1
SSBP2-218ENST00000514493 MEFVO15553 781 aaPredicted RBP21.3■■□□□ 1
SSBP2-218ENST00000514493 C4BPAP04003 597 aaKnown RBP21.3■■□□□ 1
SSBP2-218ENST00000514493 GHRP10912 638 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 RFX1P22670 979 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 LPIN1Q14693 890 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 EFCAB13Q8IY85 973 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 ANKLE1Q8NAG6 615 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 OR5B17Q8NGF7 314 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 TAS1R2Q8TE23 839 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 ACAP3Q96P50 834 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 CHP1Q99653 195 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 AGO3Q9H9G7 860 aaKnown RBP21.3■■□□□ 1
SSBP2-218ENST00000514493 NLRC4Q9NPP4 1024 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 CHST12Q9NRB3 414 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 APEX2Q9UBZ4 518 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 FHOD1Q9Y613 1164 aa21.3■■□□□ 1
SSBP2-218ENST00000514493 PAK2Q13177 524 aa21.29■■□□□ 1
SSBP2-218ENST00000514493 USP38Q8NB14 1042 aa21.29■■□□□ 1
SSBP2-218ENST00000514493 SYN2Q92777 582 aaPredicted RBP21.29■■□□□ 1
SSBP2-218ENST00000514493 TMEM106CQ9BVX2 250 aa21.29■■□□□ 1
SSBP2-218ENST00000514493 NXF3Q9H4D5 531 aaKnown RBP21.29■■□□□ 1
SSBP2-218ENST00000514493 ASB7Q9H672 318 aa21.29■■□□□ 1
SSBP2-218ENST00000514493 CCDC175P0C221 793 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 COL6A1P12109 1028 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 CD52P31358 61 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 NFX1Q12986 1120 aaKnown RBP21.28■■□□□ 1
SSBP2-218ENST00000514493 BIRC3Q13489 604 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 SLC10A6Q3KNW5 377 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 TWF2Q6IBS0 349 aaKnown RBP21.28■■□□□ 1
SSBP2-218ENST00000514493 SEMA4DQ92854 862 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 C16orf45Q96MC5 204 aaPredicted RBP21.28■■□□□ 1
SSBP2-218ENST00000514493 DESI2Q9BSY9 194 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 OSBPL7Q9BZF2 842 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 MTMR12Q9C0I1 747 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 RAB20Q9NX57 234 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 PADI3Q9ULW8 664 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 LACTBL1A8MY62 500 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 PIK3CAP42336 1068 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 DUOXA2Q1HG44 320 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 SLC39A5Q6ZMH5 540 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 SNX27Q96L92 541 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 SNTG2Q9NY99 539 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 MYO6Q9UM54 1294 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 ADGRG1Q9Y653 693 aa21.28■■□□□ 1
SSBP2-218ENST00000514493 GOLGA6L9A6NEM1 432 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 TLR3O15455 904 aaKnown RBP21.27■■□□□ 1
SSBP2-218ENST00000514493 PQBP1O60828 265 aaKnown RBP21.27■■□□□ 1
SSBP2-218ENST00000514493 LRRN2O75325 713 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 VNN1O95497 513 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 HLA-DRAP01903 254 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 NFICP08651 508 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 TMEM191BP0C7N4 346 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 BFSP2Q13515 415 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 C1orf53Q5VUE5 145 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 IQCEQ6IPM2 695 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 GJB7Q6PEY0 223 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 NYAP1Q6ZVC0 841 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 ANKRD33Q7Z3H0 272 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 CD302Q8IX05 232 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 DIS3LQ8TF46 1054 aaKnown RBP21.27■■□□□ 1
SSBP2-218ENST00000514493 ANKRD36BP1Q96IX9 119 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 PLEKHA5Q9HAU0 1116 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 AJAP1Q9UKB5 411 aaPredicted RBP21.27■■□□□ 1
SSBP2-218ENST00000514493 HES2Q9Y543 173 aa21.27■■□□□ 1
SSBP2-218ENST00000514493 SCN5AQ14524 2016 aa21.27■□□□□ 0.99
SSBP2-218ENST00000514493 RBAK-RBAKDNI3L0D1 243 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 ZC3H11AO75152 810 aaKnown RBP eCLIP21.26■□□□□ 0.99
SSBP2-218ENST00000514493 RECQL4O94761 1208 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 NDUFA10O95299 355 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 ATN1P54259 1190 aaPredicted RBP21.26■□□□□ 0.99
SSBP2-218ENST00000514493 YARSP54577 528 aaKnown RBP21.26■□□□□ 0.99
SSBP2-218ENST00000514493 TFAMQ00059 246 aaKnown RBP21.26■□□□□ 0.99
SSBP2-218ENST00000514493 DNTTIP2Q5QJE6 756 aaKnown RBP21.26■□□□□ 0.99
SSBP2-218ENST00000514493 SFMBT2Q5VUG0 894 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 JADE1Q6IE81 842 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.26■□□□□ 0.99
SSBP2-218ENST00000514493 LRRC8DQ7L1W4 858 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 CCDC170Q8IYT3 715 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 C2CD2Q9Y426 696 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 IPPQ9Y573 584 aa21.26■□□□□ 0.99
SSBP2-218ENST00000514493 PITPNM1O00562 1244 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 OFD1O75665 1012 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 TNNC2P02585 160 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 SELPP16109 830 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 CYLC1P35663 651 aaPredicted RBP21.25■□□□□ 0.99
SSBP2-218ENST00000514493 JAM2P57087 298 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 MBTPS1Q14703 1052 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 PHLDB3Q6NSJ2 640 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 TRAPPC11Q7Z392 1133 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 NT5DC4Q86YG4 428 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 ARHGEF19Q8IW93 802 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 REXO1L1PQ8IX06 675 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 SMG8Q8ND04 991 aaKnown RBP21.25■□□□□ 0.99
SSBP2-218ENST00000514493 SPAG5Q96R06 1193 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 NHEJ1Q9H9Q4 299 aaPredicted RBP21.25■□□□□ 0.99
SSBP2-218ENST00000514493 EPN1Q9Y6I3 576 aaPredicted RBP21.25■□□□□ 0.99
SSBP2-218ENST00000514493 CAPN15O75808 1086 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 RAPGEF1Q13905 1077 aa21.25■□□□□ 0.99
SSBP2-218ENST00000514493 DSC3Q14574 896 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms