RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ANP32CO43423 234 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RNF40O75150 1001 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 NR1I2O75469 434 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 TADA2AO75478 443 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 SFPQP23246 707 aaKnown RBP eCLIP3.66□□□□□ -1.82
CHD1-211ENST00000514344 HOXA9P31269 272 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 OR1D2P34982 312 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 PTGER3P43115 390 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 PSMD5Q16401 504 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 CCDC157Q569K6 752 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 FAM171A1Q5VUB5 890 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 KSR1Q8IVT5 923 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 SMARCD2Q92925 531 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 GPATCH3Q96I76 525 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 PGBD1Q96JS3 809 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 NLRP4Q96MN2 994 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 GCOM2Q9BZD3 368 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 POLMQ9NP87 494 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 TRPV5Q9NQA5 729 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 ZSWIM5Q9P217 1185 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 TDRD15B5MCY1 1934 aaKnown RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 USP9YO00507 2555 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 SETD2Q9BYW2 2564 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 PALM3A6NDB9 673 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 ARL5CA6NH57 179 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 SPDYE3A6NKU9 549 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 GOLGA8CPA6NN73 597 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 B8ZZF3 427 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 MAFGO15525 162 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 ZNF623O75123 536 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 AKAP3O75969 853 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RAB27AP51159 221 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 SEMG2Q02383 582 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 TRAF1Q13077 416 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 ANO7Q6IWH7 933 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 ABHD15Q6UXT9 468 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RHPN2Q8IUC4 686 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 MFSD6LQ8IWD5 586 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 SCUBE3Q8IX30 993 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 MINDY1Q8N5J2 469 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RLN3Q8WXF3 142 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RSPH1Q8WYR4 309 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 FAM227BQ96M60 508 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 UBAC1Q9BSL1 405 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 MIOSQ9NXC5 875 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 NXF1Q9UBU9 619 aaKnown RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 SAMM50Q9Y512 469 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 SPTBN1Q01082 2364 aaKnown RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 SPENQ96T58 3664 aaKnown RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 NBASA2RRP1 2371 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 IGKV6D-21A0A0A0MT36 114 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 MYBPHLA2RUH7 354 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 MAGEB2O15479 319 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 ZNF862O60290 1169 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 OPHN1O60890 802 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 ATG7O95352 703 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 EFEMP2O95967 443 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 LRG1P02750 347 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 PTPN2P17706 415 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 U2AF2P26368 475 aaKnown RBP eCLIP3.66□□□□□ -1.822e-6■■□□□ 14.5
CHD1-211ENST00000514344 PSMD2Q13200 908 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 KARSQ15046 597 aaKnown RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 PDZD4Q76G19 769 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 GPR155Q7Z3F1 870 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 SLCO6A1Q86UG4 719 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 ZNF589Q86UQ0 364 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 RALGPS2Q86X27 583 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 FMNL3Q8IVF7 1028 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 CAMKK1Q8N5S9 505 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 FRMD1Q8N878 549 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RPLP0P6Q8NHW5 317 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 LNX1Q8TBB1 728 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 DEPDC1BQ8WUY9 529 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RSPRY1Q96DX4 576 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 TMEM209Q96SK2 561 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 TTPALQ9BTX7 342 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 TRAIPQ9BWF2 469 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 COLEC11Q9BWP8 271 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RNF41Q9H4P4 317 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 PRORYQ9H606 182 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 RIOX1Q9H6W3 641 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 C8orf33Q9H7E9 229 aaPredicted RBP3.66□□□□□ -1.82
CHD1-211ENST00000514344 PSTPIP2Q9H939 334 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 TCEAL9Q9UHQ7 104 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 CEP131Q9UPN4 1083 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 CDY1Q9Y6F8 540 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 KNL1Q8NG31 2342 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 CELSR1Q9NYQ6 3014 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 BSNQ9UPA5 3926 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 A0A0D9SFI3 127 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 WDR27A2RRH5 827 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 TMEM150BA6NC51 233 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 CASTOR2A6NHX0 329 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 PRRG1O14668 218 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 ATG13O75143 517 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 MYL4P12829 197 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 CD59P13987 128 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 CXADRP78310 365 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 CREMQ03060 361 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms