RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 CBX8Q9HC52 389 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 FANCLQ9NW38 375 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 CPSF3Q9UKF6 684 aaKnown RBP11.02□□□□□ -0.65
NEDD9-214ENST00000513989 MTCH2Q9Y6C9 303 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 RALGAPA2Q2PPJ7 1873 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 ZMYM2Q9UBW7 1377 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 KIAA1671Q9BY89 1806 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 TNFRSF10AO00220 468 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 AKAP3O75969 853 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 AKAP5P24588 427 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 EEF1GP26641 437 aaKnown RBP11.01□□□□□ -0.65
NEDD9-214ENST00000513989 MTIF2P46199 727 aaKnown RBP11.01□□□□□ -0.65
NEDD9-214ENST00000513989 WDR5P61964 334 aaKnown RBP11.01□□□□□ -0.65
NEDD9-214ENST00000513989 DEFB103AP81534 67 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 TFF2Q03403 129 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 CYP24A1Q07973 514 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 CETN1Q12798 172 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 FILIP1LQ4L180 1135 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 NT5DC4Q86YG4 428 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 CBWD2Q8IUF1 395 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 DHX40Q8IX18 779 aaKnown RBP11.01□□□□□ -0.65
NEDD9-214ENST00000513989 SMG8Q8ND04 991 aaKnown RBP11.01□□□□□ -0.65
NEDD9-214ENST00000513989 TMC2Q8TDI7 906 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 TOP1MTQ969P6 601 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
NEDD9-214ENST00000513989 RPS6KC1Q96S38 1066 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 ZBED2Q9BTP6 218 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 HAPLN2Q9GZV7 340 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 NXF3Q9H4D5 531 aaKnown RBP11.01□□□□□ -0.65
NEDD9-214ENST00000513989 RSAD1Q9HA92 442 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 SLC38A7Q9NVC3 462 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 DERAQ9Y315 318 aa11.01□□□□□ -0.65
NEDD9-214ENST00000513989 CARNS1A5YM72 827 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 LACTBL1A8MY62 500 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 KCNJ18B7U540 433 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 RECQL4O94761 1208 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 UPP2O95045 317 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 THP07101 528 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 DLATP10515 647 aaKnown RBP11□□□□□ -0.65
NEDD9-214ENST00000513989 BMP1P13497 986 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 TNNI1P19237 187 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 GTF2H1P32780 548 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 VAMP7P51809 220 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 MRPS5P82675 430 aaKnown RBP11□□□□□ -0.65
NEDD9-214ENST00000513989 KCNJ12Q14500 433 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 PSMD6Q15008 389 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 IQCB1Q15051 598 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 ENOX2Q16206 610 aaKnown RBP11□□□□□ -0.65
NEDD9-214ENST00000513989 DUOXA2Q1HG44 320 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 SEZ6Q53EL9 994 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 TCP11X2Q5H9J9 407 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 TCERG1LQ5VWI1 586 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 CRELD2Q6UXH1 353 aaPredicted RBP11□□□□□ -0.65
NEDD9-214ENST00000513989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11□□□□□ -0.65
NEDD9-214ENST00000513989 LRRC55Q6ZSA7 311 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 ZNF598Q86UK7 904 aaKnown RBP11□□□□□ -0.65
NEDD9-214ENST00000513989 LUZP1Q86V48 1076 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 BRSK2Q8IWQ3 736 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 MICALL1Q8N3F8 863 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 CCDC127Q96BQ5 260 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 FAM193BQ96PV7 902 aaPredicted RBP11□□□□□ -0.65
NEDD9-214ENST00000513989 HES2Q9Y543 173 aa11□□□□□ -0.65
NEDD9-214ENST00000513989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11□□□□□ -0.65
NEDD9-214ENST00000513989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 TTC26A0AVF1 554 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 ARL5CA6NH57 179 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 PES1O00541 588 aaKnown RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 FAM189A1O60320 539 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 N4BP1O75113 896 aaKnown RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 PHACTR2O75167 634 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 OFD1O75665 1012 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 SERPINC1P01008 464 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 TNNC2P02585 160 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 TPM3P06753 285 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 ADRB2P07550 413 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 CXCL8P10145 99 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 KCNE1P15382 129 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 TNFSF9P41273 254 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 CASP4P49662 377 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 KCNQ1P51787 676 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 MARSP56192 900 aaKnown RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 TFAMQ00059 246 aaKnown RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 RNASELQ05823 741 aaKnown RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 TMEM132DQ14C87 1099 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 SLC10A6Q3KNW5 377 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 NOMO2Q5JPE7 1267 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 ALKAL1Q6UXT8 129 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 AGMOQ6ZNB7 445 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 WDR49Q8IV35 697 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 CEP120Q8N960 986 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 RNF214Q8ND24 703 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 BEST2Q8NFU1 509 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 PARD3BQ8TEW8 1205 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 LINC01599Q8WXQ3 324 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 ARNTL2Q8WYA1 636 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 LPPQ93052 612 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 KIF12Q96FN5 646 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms