RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 MAPK13O15264 365 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 NUDT17P0C025 328 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 MTM1Q13496 603 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 TEKT3Q9BXF9 490 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 CARD9Q9H257 536 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 ADAM7Q9H2U9 754 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 BCAS3Q9H6U6 928 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.27□□□□□ -0.76
VCAN-210ENST00000513960 ZBTB21Q9ULJ3 1066 aa10.27□□□□□ -0.76
VCAN-210ENST00000513960 TCRBV7S2A1N4TA0A589 114 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 CFAP69A5D8W1 941 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 CES2O00748 559 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 NVLO15381 856 aaKnown RBP10.27□□□□□ -0.77
VCAN-210ENST00000513960 PSMD10O75832 226 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 ZCCHC18P0CG32 403 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 KCNA3P22001 575 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 MRPS35P82673 323 aaKnown RBP10.27□□□□□ -0.77
VCAN-210ENST00000513960 PRUNE1Q86TP1 453 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 FAM151AQ8WW52 585 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 HES6Q96HZ4 224 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 SLCO1B3Q9NPD5 702 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 TGFB1I1O43294 461 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 RAD17O75943 681 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 ANXA13P27216 316 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 PPP2R5CQ13362 524 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 LRRC23Q53EV4 343 aaPredicted RBP10.27□□□□□ -0.77
VCAN-210ENST00000513960 DCAF12L1Q5VU92 463 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 CDCA2Q69YH5 1023 aaPredicted RBP10.27□□□□□ -0.77
VCAN-210ENST00000513960 ZDHHC24Q6UX98 284 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 C1orf186Q6ZWK4 172 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 PALB2Q86YC2 1186 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 SLC20A1Q8WUM9 679 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 ZNF653Q96CK0 615 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 RNPEPL1Q9HAU8 725 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 NPHS2Q9NP85 383 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 ZFP69BQ9UJL9 534 aa10.27□□□□□ -0.77
VCAN-210ENST00000513960 EXOC1LA0A1B0GW35 172 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 GTPBP10A4D1E9 387 aaKnown RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 SPDYE2BA6NHP3 402 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 DDX39AO00148 427 aaKnown RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 ZBTB39O15060 712 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 SPDYE6P0CI01 402 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 PRKCIP41743 596 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 TUBP50607 506 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 MYL7Q01449 175 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 OVGP1Q12889 678 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 FYB2Q5VWT5 728 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 FAM160B2Q86V87 743 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 ECHDC2Q86YB7 292 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 PDCD7Q8N8D1 485 aaKnown RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 PRELID2Q8N945 189 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 SLC5A5Q92911 643 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 UBN1Q9NPG3 1134 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 ZDHHC18Q9NUE0 388 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 TTC7AQ9ULT0 858 aaPredicted RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 BTNL10A8MVZ5 291 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 SKIP12755 728 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 RARGP13631 454 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 CALB2P22676 271 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 PTDSS1P48651 473 aaKnown RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 RCN1Q15293 331 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 CPNE8Q86YQ8 564 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 DDX50Q9BQ39 737 aaKnown RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 MKNK1Q9BUB5 465 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 KIAA1683Q9H0B3 1180 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 PKD2L1Q9P0L9 805 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 ZNF70Q9UC06 446 aaPredicted RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 IPO5O00410 1097 aaKnown RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 UNC5CO95185 931 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 GAS8O95995 478 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 CHKAP35790 457 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 COILP38432 576 aaPredicted RBP10.26□□□□□ -0.77
VCAN-210ENST00000513960 CDR2Q01850 454 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 SLC15A2Q16348 729 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 TTC27Q6P3X3 843 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 MIGA2Q7L4E1 593 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 LDHDQ86WU2 507 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 PPM1KQ8N3J5 372 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 LARGE2Q8N3Y3 721 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 RASGEF1CQ8N431 466 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 TEX9Q8N6V9 391 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 B4GALNT2Q8NHY0 566 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 STK32AQ8WU08 396 aa10.26□□□□□ -0.77
VCAN-210ENST00000513960 YDJCA8MPS7 323 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 TMEM253P0C7T8 217 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 PYGMP11217 842 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 MUTP22033 750 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 CPA2P48052 419 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 CETN1Q12798 172 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 CFAP157Q5JU67 520 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 ANO7Q6IWH7 933 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 RSBN1LQ6PCB5 846 aaPredicted RBP10.25□□□□□ -0.77
VCAN-210ENST00000513960 PPP1R21Q6ZMI0 780 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 ZNF720Q7Z2F6 126 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 ANKRD35Q8N283 1001 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 UCMAQ8WVF2 138 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 ELMO3Q96BJ8 720 aa10.25□□□□□ -0.77
VCAN-210ENST00000513960 LXNQ9BS40 222 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms