RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 DHX38Q92620 1227 aaKnown RBP13.85□□□□□ -0.19
PVT1-203ENST00000513868 APOBEC3GQ9HC16 384 aaKnown RBP13.85□□□□□ -0.19
PVT1-203ENST00000513868 SRRDQ9UH36 339 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 CAPN6Q9Y6Q1 641 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 ATP8B3O60423 1300 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 C17orf102A2RUQ5 167 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 SGPL1O95470 568 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 STAG3L1P0CL83 205 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 CXCL8P10145 99 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 CHRNB2P17787 502 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 HOXA11P31270 313 aaPredicted RBP13.84□□□□□ -0.19
PVT1-203ENST00000513868 MAP2K2P36507 400 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 VEGFBP49765 207 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 ENOSF1Q7L5Y1 443 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 TRAPPC11Q7Z392 1133 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 PALB2Q86YC2 1186 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 EPS8L1Q8TE68 723 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 SLC20A1Q8WUM9 679 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 SECISBP2LQ93073 1101 aaKnown RBP13.84□□□□□ -0.19
PVT1-203ENST00000513868 SCLT1Q96NL6 688 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 ARID3AQ99856 593 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 AGPAT1Q99943 283 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 MTG1Q9BT17 334 aaPredicted RBP13.84□□□□□ -0.19
PVT1-203ENST00000513868 GCOM2Q9BZD3 368 aaPredicted RBP13.84□□□□□ -0.19
PVT1-203ENST00000513868 MTMR12Q9C0I1 747 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 ACP6Q9NPH0 428 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 NOCTQ9UK39 431 aaKnown RBP13.84□□□□□ -0.19
PVT1-203ENST00000513868 MRFAP1Q9Y605 127 aa13.84□□□□□ -0.19
PVT1-203ENST00000513868 CTAGE9A4FU28 777 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 BTNL10A8MVZ5 291 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 CYP26A1O43174 497 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 ERLIN2O94905 339 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 MOCS3O95396 460 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 CLTAP09496 248 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 RARBP10826 455 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 DARSP14868 501 aaKnown RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 AMPD2Q01433 879 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 POU5F1Q01860 360 aaKnown RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 NCOA4Q13772 614 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 DUOXA2Q1HG44 320 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 SLC10A6Q3KNW5 377 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 MAP3K21Q5TCX8 1036 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 CCSAPQ6IQ19 270 aaPredicted RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 NOP9Q86U38 636 aaKnown RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 C7orf31Q8N865 590 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 LRRN4CLQ8ND94 238 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 KLHDC9Q8NEP7 349 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 U2AF1L4Q8WU68 220 aaKnown RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 TMEM40Q8WWA1 233 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 FAM212AQ96EL1 285 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 OSMRQ99650 979 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 NAPGQ99747 312 aaPredicted RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 RPF1Q9H9Y2 349 aaKnown RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 LUC7LQ9NQ29 371 aaKnown RBP13.83□□□□□ -0.2
PVT1-203ENST00000513868 C1orf112Q9NSG2 853 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 NUB1Q9Y5A7 615 aa13.83□□□□□ -0.2
PVT1-203ENST00000513868 LACTBL1A8MY62 500 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 IL18RAPO95256 599 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 ASS1P00966 412 aaKnown RBP13.82□□□□□ -0.2
PVT1-203ENST00000513868 ACO1P21399 889 aaKnown RBP13.82□□□□□ -0.2
PVT1-203ENST00000513868 USP8P40818 1118 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 NBPF20Q3BBV1 942 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 SLC47A2Q86VL8 602 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 TXLNBQ8N3L3 684 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 RNF10Q8N5U6 811 aaKnown RBP13.82□□□□□ -0.2
PVT1-203ENST00000513868 DDX1Q92499 740 aaKnown RBP13.82□□□□□ -0.2
PVT1-203ENST00000513868 FAM81BQ96LP2 452 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 GINS2Q9Y248 185 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 SCN1AP35498 2009 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 UMODL1Q5DID0 1318 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 PHACTR2O75167 634 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 SLU7O95391 586 aaKnown RBP13.82□□□□□ -0.2
PVT1-203ENST00000513868 ATP1A1P05023 1023 aaKnown RBP13.82□□□□□ -0.2
PVT1-203ENST00000513868 GNAT1P11488 350 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 TNFAIP3P21580 790 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 EIF4BP23588 611 aaKnown RBP13.82□□□□□ -0.2
PVT1-203ENST00000513868 NOP14P78316 857 aaKnown RBP13.82□□□□□ -0.2
PVT1-203ENST00000513868 HTRA3P83110 453 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 CUL2Q13617 745 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 SNX17Q15036 470 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 PCBP1Q15365 356 aaKnown RBP eCLIP13.82□□□□□ -0.24e-9■■■■□ 19.5
PVT1-203ENST00000513868 NME8Q8N427 588 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 TRIM58Q8NG06 486 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 TSC1Q92574 1164 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 PCDHB18PQ96TA0 734 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 XPNPEP3Q9NQH7 507 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 TAS2R14Q9NYV8 317 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 GTF2IRD1Q9UHL9 959 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 CNTN6Q9UQ52 1028 aa13.82□□□□□ -0.2
PVT1-203ENST00000513868 ENC1O14682 589 aa13.81□□□□□ -0.2
PVT1-203ENST00000513868 BUB1O43683 1085 aa13.81□□□□□ -0.2
PVT1-203ENST00000513868 NFICP08651 508 aa13.81□□□□□ -0.2
PVT1-203ENST00000513868 H2AFZP0C0S5 128 aa13.81□□□□□ -0.2
PVT1-203ENST00000513868 CYP11B1P15538 503 aa13.81□□□□□ -0.2
PVT1-203ENST00000513868 GALCP54803 685 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms