RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 FAM170BA6NMN3 283 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 TMEM189-UBE2V1I3L0A0 370 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 JAK2O60674 1132 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 KINO60870 393 aaKnown RBP10.64□□□□□ -0.71
TCOF1-212ENST00000513538 LILRB5O75023 590 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 XYLBO75191 536 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 PRKCBP05771 671 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 CEBPBP17676 345 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 LIG1P18858 919 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 FCARP24071 287 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 BRCC3P46736 316 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 CLCNKBP51801 687 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 CSTF1Q05048 431 aaKnown RBP10.64□□□□□ -0.71
TCOF1-212ENST00000513538 SOX4Q06945 474 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-212ENST00000513538 ST3GAL1Q11201 340 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 ELAVL2Q12926 359 aaKnown RBP10.64□□□□□ -0.71
TCOF1-212ENST00000513538 PRPF4BQ13523 1007 aaKnown RBP10.64□□□□□ -0.71
TCOF1-212ENST00000513538 ME3Q16798 604 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 NT5DC1Q5TFE4 455 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 TSSK4Q6SA08 328 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 TPRG1Q6ZUI0 275 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 ZBTB8OSQ8IWT0 167 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 DIS3L2Q8IYB7 885 aaKnown RBP10.64□□□□□ -0.71
TCOF1-212ENST00000513538 ZBTB44Q8NCP5 570 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 NSUN7Q8NE18 718 aaKnown RBP10.64□□□□□ -0.71
TCOF1-212ENST00000513538 MCPH1Q8NEM0 835 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 CLDN23Q96B33 292 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 BCO2Q9BYV7 579 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 OSBPL6Q9BZF3 934 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 FBXO4Q9UKT5 387 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 KCNH3Q9ULD8 1083 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 CDY1Q9Y6F8 540 aa10.64□□□□□ -0.71
TCOF1-212ENST00000513538 ACKR2O00590 384 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 SPTLC1O15269 473 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 LAMTOR5O43504 91 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 RHOP08100 348 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.71
TCOF1-212ENST00000513538 ATP2B1P20020 1258 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 TGM1P22735 817 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 RBM25P49756 843 aaKnown RBP10.63□□□□□ -0.71
TCOF1-212ENST00000513538 ROR1Q01973 937 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 ECM1Q16610 540 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 MAPK6Q16659 721 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 UPP1Q16831 310 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 UVSSAQ2YD98 709 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 PRSS36Q5K4E3 855 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 VARS2Q5ST30 1063 aaKnown RBP10.63□□□□□ -0.71
TCOF1-212ENST00000513538 TANGO2Q6ICL3 276 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 CEP120Q8N960 986 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 GTF3C6Q969F1 213 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 TCEAL4Q96EI5 215 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 MCRS1Q96EZ8 462 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 TUFT1Q9NNX1 390 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 PRMT8Q9NR22 394 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-212ENST00000513538 HEBP1Q9NRV9 189 aa10.63□□□□□ -0.71
TCOF1-212ENST00000513538 SMG5Q9UPR3 1016 aaKnown RBP10.63□□□□□ -0.71
TCOF1-212ENST00000513538 MRPS23Q9Y3D9 190 aaKnown RBP10.63□□□□□ -0.71
TCOF1-212ENST00000513538 TPRP12270 2363 aaKnown RBP10.63□□□□□ -0.71
TCOF1-212ENST00000513538 NCANO14594 1321 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 WDR27A2RRH5 827 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 MEFVO15553 781 aaPredicted RBP10.62□□□□□ -0.71
TCOF1-212ENST00000513538 ECI2O75521 394 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 B3GAT3O94766 335 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 TDGF1P13385 188 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 CYP11B2P19099 503 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 MCM7P33993 719 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 CCR2P41597 374 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 PFKPQ01813 784 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 MTAPQ13126 283 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 PDXDC1Q6P996 788 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 TMEM130Q8N3G9 435 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 WASF1Q92558 559 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 POLR3CQ9BUI4 534 aaPredicted RBP10.62□□□□□ -0.71
TCOF1-212ENST00000513538 C2orf40Q9H1Z8 148 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 EPC1Q9H2F5 836 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 AVENQ9NQS1 362 aaPredicted RBP10.62□□□□□ -0.71
TCOF1-212ENST00000513538 ZSCAN32Q9NX65 697 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 PCDHGA2Q9Y5H1 932 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 BACE2Q9Y5Z0 518 aa10.62□□□□□ -0.71
TCOF1-212ENST00000513538 SMIM28A0A1B0GU29 152 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 ARHGEF37A1IGU5 675 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 TBC1D4O60343 1298 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 ABLIM3O94929 683 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 SEC24AO95486 1093 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 NAMPTP43490 491 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 RPS9P46781 194 aaKnown RBP10.61□□□□□ -0.71
TCOF1-212ENST00000513538 ATXN1P54253 815 aaKnown RBP10.61□□□□□ -0.71
TCOF1-212ENST00000513538 GRM2Q14416 872 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 DCAF4L1Q3SXM0 396 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 XKR4Q5GH76 650 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 FAM78AQ5JUQ0 283 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 ZBTB41Q5SVQ8 909 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 SLC8B1Q6J4K2 584 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 TAS1R3Q7RTX0 852 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 DEPTORQ8TB45 409 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 ZMAT2Q96NC0 199 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms