RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 ANKRD36BP1Q96IX9 119 aa17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 PDE11AQ9HCR9 933 aa17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 TBC1D13Q9NVG8 400 aa17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 UBQLN1Q9UMX0 589 aaKnown RBP17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 RWDD3Q9Y3V2 267 aa17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 C2CD2Q9Y426 696 aa17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 TDRD15B5MCY1 1934 aaKnown RBP17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
SH3TC1-223ENST00000513495 GOLGA6L19H0YKK7 550 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 IKBKBO14920 756 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 TPM2P07951 284 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 GATMP50440 423 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 TFAMQ00059 246 aaKnown RBP17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 BFSP1Q12934 665 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 DUOXA2Q1HG44 320 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 TCERG1LQ5VWI1 586 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 JADE1Q6IE81 842 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 WDR49Q8IV35 697 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 AOPEPQ8N6M6 819 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 ZSWIM2Q8NEG5 633 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 UROC1Q96N76 676 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 PRO3102Q9H379 93 aa17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 FNDC1Q4ZHG4 1894 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-223ENST00000513495 PTGESO14684 152 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 LAG3P18627 525 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 CYP3A5P20815 502 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 MTIF2P46199 727 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 ALDH7A1P49419 539 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 RABGGTBP53611 331 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 SPAG1Q07617 926 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 TUSC3Q13454 348 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 DCAF17Q5H9S7 520 aaPredicted RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 FAM200AQ8TCP9 573 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 DDX27Q96GQ7 796 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 PPP1R10Q96QC0 940 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 CGRRF1Q99675 332 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 TMEM175Q9BSA9 504 aa17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 COLQQ9Y215 455 aaPredicted RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 TNRC18O15417 2968 aaPredicted RBP17.04■□□□□ 0.32
SH3TC1-223ENST00000513495 TRIP11Q15643 1979 aa17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 GRXCR1A8MXD5 290 aa17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 ZC3H11AO75152 810 aaKnown RBP eCLIP17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 PHACTR2O75167 634 aa17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 NFICP08651 508 aa17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 CDK11BP21127 795 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 EEF1GP26641 437 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 SMAD3P84022 425 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 GSTCDQ8NEC7 633 aa17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 PARD3BQ8TEW8 1205 aa17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 RC3H2Q9HBD1 1191 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 PCDHB12Q9Y5F1 795 aa17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 COL4A6Q14031 1691 aa17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 PDCD11Q14690 1871 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-223ENST00000513495 ANK1P16157 1881 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 ALDH2P05091 517 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 GTF2H1P32780 548 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 RPL9P32969 192 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 PPM1AP35813 382 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 OR1G1P47890 313 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 MARSP56192 900 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 CETN1Q12798 172 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 BIRC3Q13489 604 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 LRIT3Q3SXY7 679 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 FAM109BQ6ICB4 259 aaPredicted RBP17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 ZMAT2Q96NC0 199 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 ZNF558Q96NG5 402 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 SAMD11Q96NU1 681 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 MED15Q96RN5 788 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 COLEC11Q9BWP8 271 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 SLC28A3Q9HAS3 691 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 INTS13Q9NVM9 706 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 MIOSQ9NXC5 875 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 DPP3Q9NY33 737 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 ITGA11Q9UKX5 1188 aa17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 MRPL42Q9Y6G3 142 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-223ENST00000513495 LRRIQ3A6PVS8 624 aaPredicted RBP17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 KCNJ18B7U540 433 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 N4BP1O75113 896 aaKnown RBP17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 CLSTN1O94985 981 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 CA3P07451 260 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 PRKCSHP14314 528 aaPredicted RBP17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 AFF1P51825 1210 aaKnown RBP17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 TRPC3Q13507 836 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 KCNJ12Q14500 433 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 COLGALT2Q8IYK4 626 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 PBX4Q9BYU1 374 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 MTMR12Q9C0I1 747 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 CBX8Q9HC52 389 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 FANCLQ9NW38 375 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 PLAGL2Q9UPG8 496 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 FAN1Q9Y2M0 1017 aa17.01■□□□□ 0.31
SH3TC1-223ENST00000513495 LINC01553A4QN01 128 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 CASTOR2A6NHX0 329 aa17■□□□□ 0.31
SH3TC1-223ENST00000513495 MEFVO15553 781 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms