RNA–Protein interactions for RNA: ENST00000513274.5

COPB2-211, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 3

Gene COPB2, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-211ENST00000513274 R4GN57 208 aa12.59□□□□□ -0.39
COPB2-211ENST00000513274 CACNA1IQ9P0X4 2223 aa12.59□□□□□ -0.39
COPB2-211ENST00000513274 SMIM28A0A1B0GU29 152 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 HIP1RO75146 1068 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 XYLBO75191 536 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 C1RP00736 705 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 HNRNPA1P09651 372 aaKnown RBP eCLIP12.58□□□□□ -0.4
COPB2-211ENST00000513274 FGFR3P22607 806 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 NPTX2P47972 431 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 SOX4Q06945 474 aaPredicted RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 ORC2Q13416 577 aaPredicted RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 RAB33AQ14088 237 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 IL17AQ16552 155 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 UPP1Q16831 310 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 ZNF568Q3ZCX4 644 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 SEZ6Q53EL9 994 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 KCNK18Q7Z418 384 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 TMEM130Q8N3G9 435 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 FGF13Q92913 245 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 MCRS1Q96EZ8 462 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 ZBTB45Q96K62 511 aaPredicted RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 ZSCAN31Q96LW9 406 aaPredicted RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 ACO2Q99798 780 aaKnown RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 KXD1Q9BQD3 176 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 RUSC1Q9BVN2 902 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 CCDC94Q9BW85 323 aaPredicted RBP12.58□□□□□ -0.4
COPB2-211ENST00000513274 CDT1Q9H211 546 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 KMT5AQ9NQR1 393 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 ARHGEF3Q9NR81 526 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 DNM3Q9UQ16 869 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 TNFSF13BQ9Y275 285 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 SIT1Q9Y3P8 196 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 WDR87Q6ZQQ6 2873 aa12.58□□□□□ -0.4
COPB2-211ENST00000513274 SLC16A4O15374 487 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 PAPLNO95428 1278 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 CD72P21854 359 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 MUTP22033 750 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 PDIA5Q14554 519 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 KRT79Q5XKE5 535 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 PDXDC1Q6P996 788 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 TAS1R3Q7RTX0 852 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 DAW1Q8N136 415 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 IGSF22Q8N9C0 903 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
COPB2-211ENST00000513274 ZMAT2Q96NC0 199 aaKnown RBP12.57□□□□□ -0.4
COPB2-211ENST00000513274 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
COPB2-211ENST00000513274 PODXLO00592 558 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 TRAPPC3O43617 180 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
COPB2-211ENST00000513274 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
COPB2-211ENST00000513274 GLULP15104 373 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 GRM5P41594 1212 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 TRAPPC10P48553 1259 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 PABPC1LQ4VXU2 614 aaKnown RBP12.56□□□□□ -0.4
COPB2-211ENST00000513274 RINT1Q6NUQ1 792 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 DTHD1Q6ZMT9 781 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 APBB1IPQ7Z5R6 666 aaPredicted RBP12.56□□□□□ -0.4
COPB2-211ENST00000513274 C18orf25Q96B23 403 aaPredicted RBP12.56□□□□□ -0.4
COPB2-211ENST00000513274 UROC1Q96N76 676 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 ACAP3Q96P50 834 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 KIF2CQ99661 725 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 MRPL4Q9BYD3 311 aaKnown RBP12.56□□□□□ -0.4
COPB2-211ENST00000513274 RAB34Q9BZG1 259 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 SLC2A4RGQ9NR83 387 aa12.56□□□□□ -0.4
COPB2-211ENST00000513274 MRPS23Q9Y3D9 190 aaKnown RBP12.56□□□□□ -0.4
COPB2-211ENST00000513274 ZFP37Q9Y6Q3 630 aaPredicted RBP12.56□□□□□ -0.4
COPB2-211ENST00000513274 PDCD11Q14690 1871 aaKnown RBP12.55□□□□□ -0.4
COPB2-211ENST00000513274 NPHP3-ACAD11A0A0J9YXS1 232 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 TMEM189-UBE2V1I3L0A0 370 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 PRRG1O14668 218 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.48e-6■■■■□ 25
COPB2-211ENST00000513274 ELF1P32519 619 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.42e-10■■■□□ 15.4
COPB2-211ENST00000513274 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
COPB2-211ENST00000513274 SPAG1Q07617 926 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 DMP1Q13316 513 aaPredicted RBP12.55□□□□□ -0.4
COPB2-211ENST00000513274 UBXN2BQ14CS0 331 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 UVSSAQ2YD98 709 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 SLC44A4Q53GD3 710 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 VARS2Q5ST30 1063 aaKnown RBP12.55□□□□□ -0.4
COPB2-211ENST00000513274 PHLDB3Q6NSJ2 640 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 POTEHQ6S545 545 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 ALKAL1Q6UXT8 129 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 ANKS3Q6ZW76 656 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 C1orf186Q6ZWK4 172 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 CORO1BQ9BR76 489 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 MMTAG2Q9BU76 263 aaKnown RBP12.55□□□□□ -0.4
COPB2-211ENST00000513274 PLA2G2FQ9BZM2 168 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 TMEM134Q9H6X4 195 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 PTPRHQ9HD43 1115 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
COPB2-211ENST00000513274 TOPORSQ9NS56 1045 aaPredicted RBP12.55□□□□□ -0.4
COPB2-211ENST00000513274 ANKFY1Q9P2R3 1169 aa12.55□□□□□ -0.4
COPB2-211ENST00000513274 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
COPB2-211ENST00000513274 NUB1Q9Y5A7 615 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms