RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 ABCA6Q8N139 1617 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 FAM47DPA6NHR8 397 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 ENTPD3O75355 529 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 CTDNEP1O95476 244 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 NME3Q13232 169 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 CAPRIN1Q14444 709 aaKnown RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 WDR72Q3MJ13 1102 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 JAMLQ86YT9 394 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 RIBC1Q8N443 379 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 SH2D3CQ8N5H7 860 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 RNF149Q8NC42 400 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 OR6P1Q8NGX9 317 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 URGCPQ8TCY9 931 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 YIPF3Q9GZM5 350 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 NDUFB10O96000 172 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 USP38Q8NB14 1042 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 ANKS1AQ92625 1134 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 RPAP3Q9H6T3 665 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 SCHIP1Q9P0W5 487 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 IL10P22301 178 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 RPA1P27694 616 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 STRIP1Q5VSL9 837 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 ARHGEF26Q96DR7 871 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 HACD3Q9P035 362 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 NEU2Q9Y3R4 380 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 RBP5P82980 135 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 TBCCQ15814 346 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 UGP2Q16851 508 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 GRAMD4Q6IC98 578 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 ZNF677Q86XU0 584 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 ANKMY2Q8IV38 441 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 RIT2Q99578 217 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 TSSK1BQ9BXA7 367 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 EPB41L4AQ9HCS5 686 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-210ENST00000512756 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-210ENST00000512756 KCNN4O15554 427 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 CUL3Q13618 768 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 RABGAP1LQ5R372 815 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 ERP44Q9BS26 406 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 RAD51CO43502 376 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 PDHBP11177 359 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 LSP1P33241 339 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 CENPCQ03188 943 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 CAPRIN2Q6IMN6 1127 aaKnown RBP13.14□□□□□ -0.31
COL11A1-210ENST00000512756 HHIPL2Q6UWX4 724 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 ASAP3Q8TDY4 903 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 PDCD6IPQ8WUM4 868 aaKnown RBP13.14□□□□□ -0.31
COL11A1-210ENST00000512756 FAM167BQ9BTA0 163 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 TEX12Q9BXU0 123 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 TRIM54Q9BYV2 358 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 TRIM10Q9UDY6 481 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 RASA1P20936 1047 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 HDAC4P56524 1084 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 NCOA4Q13772 614 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 KRT33BQ14525 404 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 BTBD8Q5XKL5 378 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
COL11A1-210ENST00000512756 RBBP8NLQ8NC74 664 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-210ENST00000512756 KRT35Q92764 455 aa13.14□□□□□ -0.31
COL11A1-210ENST00000512756 PDGFRAP16234 1089 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 C2orf69Q8N8R5 385 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 SLC30A5Q8TAD4 765 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 BATF3Q9NR55 127 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 ZC3H7BQ9UGR2 993 aaKnown RBP13.13□□□□□ -0.31
COL11A1-210ENST00000512756 MYBP10242 640 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 SLC9A1P19634 815 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-210ENST00000512756 COG2Q14746 738 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 KLHDC7AQ5VTJ3 777 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-210ENST00000512756 PGBD4Q96DM1 585 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 ABCE1P61221 599 aaKnown RBP13.13□□□□□ -0.31
COL11A1-210ENST00000512756 STX3Q13277 289 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 OSBPL8Q9BZF1 889 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 C3orf70A6NLC5 250 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-210ENST00000512756 LONRF1Q17RB8 773 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 C16orf87Q6PH81 154 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 SH3TC2Q8TF17 1288 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 SEC16BQ96JE7 1060 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 TMEM117Q9H0C3 514 aa13.13□□□□□ -0.31
COL11A1-210ENST00000512756 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-210ENST00000512756 DLC1Q96QB1 1528 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 MAFGO15525 162 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 HADHAP40939 763 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms