RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	CELF5	Q8N6W0	485 aa	Known RBP	4.27	□□□□□ -1.73
CAST-238	ENST00000512620	ANKRD53	Q8N9V6	530 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	VPS37A	Q8NEZ2	397 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
CAST-238	ENST00000512620	KLHDC4	Q8TBB5	520 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	ADAMTS17	Q8TE56	1095 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	PNISR	Q8TF01	805 aa	Known RBP	4.27	□□□□□ -1.73
CAST-238	ENST00000512620	FRAT1	Q92837	279 aa	Predicted RBP	4.27	□□□□□ -1.73
CAST-238	ENST00000512620	NAP1L4	Q99733	375 aa	Known RBP	4.27	□□□□□ -1.73
CAST-238	ENST00000512620	CARD11	Q9BXL7	1154 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	OSBPL6	Q9BZF3	934 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	KATNBL1	Q9H079	304 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	BHMT2	Q9H2M3	363 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	KMT5A	Q9NQR1	393 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.27	□□□□□ -1.73
CAST-238	ENST00000512620	MIA2	Q96PC5	1412 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	KDM5C	P41229	1560 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	LRPPRC	P42704	1394 aa	Known RBP	4.27	□□□□□ -1.73
CAST-238	ENST00000512620	MTUS2	Q5JR59	1369 aa		4.27	□□□□□ -1.73
CAST-238	ENST00000512620	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	CAPN8	A6NHC0	703 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	FAM171A2	A8MVW0	826 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620		H3BUI4	141 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	AMY1A	P04745	511 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	MED14OS	P0DP75	135 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	ZKSCAN1	P17029	563 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	PCSK1	P29120	753 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	SERPINB3	P29508	390 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	SREBF1	P36956	1147 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	BUD31	P41223	144 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	WAS	P42768	502 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	LINC00310	P59036	64 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	CHAF1A	Q13111	956 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	SEMA5A	Q13591	1074 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	USP10	Q14694	798 aa	Known RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	RNF151	Q2KHN1	245 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	NBPF8	Q3BBV2	869 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	ANO6	Q4KMQ2	910 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	GJC2	Q5T442	439 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	THEMIS2	Q5TEJ8	643 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	FAM180A	Q6UWF9	173 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	DAAM2	Q86T65	1068 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	MYLK4	Q86YV6	388 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	EXOC6	Q8TAG9	804 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	ZNF480	Q8WV37	535 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	GFM2	Q969S9	779 aa	Known RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	DACT3	Q96B18	629 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	PGBD4	Q96DM1	585 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	DMRTA2	Q96SC8	542 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	NAA15	Q9BXJ9	866 aa	Known RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	NUP62CL	Q9H1M0	184 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	OR10A2	Q9H208	303 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	BARX1	Q9HBU1	254 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	PTPRH	Q9HD43	1115 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	GPRC5D	Q9NZD1	345 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	ABCF2	Q9UG63	623 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	TRPS1	Q9UHF7	1281 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	STXBP5L	Q9Y2K9	1186 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	ACTL7A	Q9Y615	435 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	CFAP20	Q9Y6A4	193 aa	Known RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	ZMYM3	Q14202	1370 aa		4.26	□□□□□ -1.73
CAST-238	ENST00000512620	KTN1	Q86UP2	1357 aa	Known RBP	4.26	□□□□□ -1.73
CAST-238	ENST00000512620	MBD5	Q9P267	1494 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	CFAP69	A5D8W1	941 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	RFXAP	O00287	272 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	B4GALT4	O60513	344 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	PPFIA4	O75335	1185 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	ENDOD1	O94919	500 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	PEX2	P28328	305 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	KIR2DL3	P43628	341 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	TM4SF4	P48230	202 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	TRAPPC10	P48553	1259 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	CDC42EP1	Q00587	391 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	MEF2A	Q02078	507 aa	Predicted RBP	4.25	□□□□□ -1.73
CAST-238	ENST00000512620	POU5F1B	Q06416	359 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	NOG	Q13253	232 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	CNN3	Q15417	329 aa	Known RBP	4.25	□□□□□ -1.73
CAST-238	ENST00000512620	KCNA10	Q16322	511 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	TMEM95	Q3KNT9	176 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	PRAMEF14	Q5SWL7	426 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	RNF220	Q5VTB9	566 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	ERAP2	Q6P179	960 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	XRRA1	Q6P2D8	792 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	USP30	Q70CQ3	517 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	HEATR3	Q7Z4Q2	680 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	RALYL	Q86SE5	291 aa	Known RBP	4.25	□□□□□ -1.73
CAST-238	ENST00000512620	TTC7B	Q86TV6	843 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	ZNF761	Q86XN6	746 aa	Predicted RBP	4.25	□□□□□ -1.73
CAST-238	ENST00000512620	TRMT2A	Q8IZ69	625 aa	Known RBP	4.25	□□□□□ -1.73
CAST-238	ENST00000512620	KIAA0319L	Q8IZA0	1049 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	KRT78	Q8N1N4	520 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	MYRIP	Q8NFW9	859 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	OR5M3	Q8NGP4	307 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	NSUN6	Q8TEA1	469 aa	Known RBP	4.25	□□□□□ -1.73
CAST-238	ENST00000512620	LRTOMT	Q8WZ04	291 aa		4.25	□□□□□ -1.73
CAST-238	ENST00000512620	AJUBA	Q96IF1	538 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms