RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 CCNYQ8ND76 341 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 HSD17B14Q9BPX1 270 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 TRAF3IP3Q9Y228 551 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 BTAF1O14981 1849 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 H0YCG3 227 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 CAPN9O14815 690 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 PLSCR1O15162 318 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 RTN2O75298 545 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 PRKCBP05771 671 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 ADRB2P07550 413 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 GTF2H1P32780 548 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 HSD17B3P37058 310 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 AMPD2Q01433 879 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 CUL1Q13616 776 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 C1orf131Q8NDD1 294 aaKnown RBP12.71□□□□□ -0.37
PRDM16-207ENST00000512462 UBA3Q8TBC4 463 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 COPS5Q92905 334 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 SGSM3Q96HU1 749 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 A1CFQ9NQ94 594 aaKnown RBP12.71□□□□□ -0.37
PRDM16-207ENST00000512462 HOMER3Q9NSC5 361 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.38
PRDM16-207ENST00000512462 RBAK-RBAKDNI3L0D1 243 aa12.71□□□□□ -0.38
PRDM16-207ENST00000512462 M0QYV0 167 aa12.71□□□□□ -0.38
PRDM16-207ENST00000512462 TATDN1Q6P1N9 297 aa12.71□□□□□ -0.38
PRDM16-207ENST00000512462 CPNE8Q86YQ8 564 aa12.71□□□□□ -0.38
PRDM16-207ENST00000512462 SCYL3Q8IZE3 742 aa12.71□□□□□ -0.38
PRDM16-207ENST00000512462 EMC1Q8N766 993 aa12.71□□□□□ -0.38
PRDM16-207ENST00000512462 PRPF31Q8WWY3 499 aaKnown RBP12.71□□□□□ -0.38
PRDM16-207ENST00000512462 PPM1EQ8WY54 764 aa12.71□□□□□ -0.38
PRDM16-207ENST00000512462 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.38
PRDM16-207ENST00000512462 MRPL47Q9HD33 250 aaKnown RBP12.71□□□□□ -0.38
PRDM16-207ENST00000512462 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 ARL1P40616 181 aaPredicted RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 NLRP11P59045 1033 aaKnown RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 MEI1Q5TIA1 1274 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 MMGT1Q8N4V1 131 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 SUCLA2Q9P2R7 463 aaPredicted RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 VAV3Q9UKW4 847 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 DUOX1Q9NRD9 1551 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 FRMD3A2A2Y4 597 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 CCDC78A2IDD5 438 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 RASSF10A6NK89 507 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 EIF3DO15371 548 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 RALAP11233 206 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 CYP11B1P15538 503 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 CA4P22748 312 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 GLE1Q53GS7 698 aaKnown RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 DARS2Q6PI48 645 aaKnown RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 TRIM7Q9C029 511 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 UBE4BO95155 1302 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 ALCAMQ13740 583 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 FAM102AQ5T9C2 384 aaPredicted RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 FBXW10Q5XX13 1052 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 NOP9Q86U38 636 aaKnown RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 LNX1Q8TBB1 728 aaPredicted RBP12.7□□□□□ -0.38
PRDM16-207ENST00000512462 TRPM4Q8TD43 1214 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 SLC5A5Q92911 643 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 GANQ9H2C0 597 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 COL24A1Q17RW2 1714 aa12.7□□□□□ -0.38
PRDM16-207ENST00000512462 TMEM253P0C7T8 217 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 ATP2A2P16615 1042 aaKnown RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 ADORA2BP29275 332 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 PSMC4P43686 418 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 CDH8P55286 799 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 HGSNATQ68CP4 663 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 TMEM35BQ8NCS4 154 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 PWWP2AQ96N64 755 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 MMP19Q99542 508 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 MIF4GDA9UHW6 222 aaKnown RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 VTNP04004 478 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 TFDP1Q14186 410 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 SETDB1Q15047 1291 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 WDR93Q6P2C0 686 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 ZNF449Q6P9G9 518 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 MOXD1Q6UVY6 613 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 LRRN4Q8WUT4 740 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 ARHGEF2Q92974 986 aaKnown RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 CFAP36Q96G28 342 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 AIPL1Q9NZN9 384 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 CACNA1SQ13698 1873 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 THSD7AQ9UPZ6 1657 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 SESN3P58005 492 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 MRPS9P82933 396 aaKnown RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 FAXCQ5TGI0 409 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 HIBCHQ6NVY1 386 aaPredicted RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 TBC1D1Q86TI0 1168 aaPredicted RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 APOBEC3FQ8IUX4 373 aaKnown RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 ZBED8Q8IZ13 594 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 EPS8L3Q8TE67 593 aaKnown RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 HNRNPLLQ8WVV9 542 aaKnown RBP12.69□□□□□ -0.38
PRDM16-207ENST00000512462 DONSONQ9NYP3 566 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms