RNA–Protein interactions for RNA: ENST00000512191.1

CAST-237, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-237ENST00000512191 H3BS24 57 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 MAFGO15525 162 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 PRPF40AO75400 957 aaKnown RBP5.35□□□□□ -1.55
CAST-237ENST00000512191 SMIM10L2AP0DMW4 78 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 SMIM10L2BP0DMW5 78 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 RAC2P15153 192 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 UBA1P22314 1058 aaKnown RBP5.35□□□□□ -1.55
CAST-237ENST00000512191 KIF5BP33176 963 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 ETV3P41162 512 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 RAP1GAPP47736 663 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 TRIM71Q2Q1W2 868 aaKnown RBP5.35□□□□□ -1.55
CAST-237ENST00000512191 HSDL1Q3SXM5 330 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 NAALADL2Q58DX5 795 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 CWC27Q6UX04 472 aaKnown RBP5.35□□□□□ -1.55
CAST-237ENST00000512191 EP400NLQ6ZTU2 488 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 CATIPQ7Z7H3 387 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 RALYLQ86SE5 291 aaKnown RBP5.35□□□□□ -1.55
CAST-237ENST00000512191 ZNF589Q86UQ0 364 aaPredicted RBP5.35□□□□□ -1.55
CAST-237ENST00000512191 NLRX1Q86UT6 975 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 TEX2Q8IWB9 1127 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 ADHFE1Q8IWW8 467 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 TMEM192Q8IY95 271 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 PIWIL2Q8TC59 973 aaKnown RBP5.35□□□□□ -1.55
CAST-237ENST00000512191 NEK9Q8TD19 979 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 RUFY2Q8WXA3 655 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 SENP7Q9BQF6 1050 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 C17orf80Q9BSJ5 609 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 C16orf70Q9BSU1 422 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 FTHL17Q9BXU8 183 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 IRF2BPLQ9H1B7 796 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 ATP13A1Q9HD20 1204 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 COL20A1Q9P218 1284 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 SEC63Q9UGP8 760 aaKnown RBP5.35□□□□□ -1.55
CAST-237ENST00000512191 RAPGEFL1Q9UHV5 662 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 SQORQ9Y6N5 450 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 KIAA1217Q5T5P2 1943 aa5.35□□□□□ -1.55
CAST-237ENST00000512191 SIP14410 1827 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 RRN3P2A6NIE6 340 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 C5orf67F2Z3F1 127 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 M0QZ92 97 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 TSPAN15O95858 294 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 LGALS2P05162 132 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 STAG3L1P0CL83 205 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 SRGAP2BP0DMP2 458 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 SMARCA1P28370 1054 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 HOXA13P31271 388 aaPredicted RBP5.34□□□□□ -1.55
CAST-237ENST00000512191 HOXC8P31273 242 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 ICAM3P32942 547 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 CTNNB1P35222 781 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 BMPR1AP36894 532 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 GNAQP50148 359 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 RRP1P56182 461 aaKnown RBP5.34□□□□□ -1.55
CAST-237ENST00000512191 GPNMBQ14956 572 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 ODR4Q5SWX8 454 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 PRAMEF13Q5VWM6 474 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAST-237ENST00000512191 TMPRSS7Q7RTY8 843 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 TMCO2Q7Z6W1 182 aaPredicted RBP5.34□□□□□ -1.55
CAST-237ENST00000512191 RPAINQ86UA6 219 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 CHD1LQ86WJ1 897 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 HOMER1Q86YM7 354 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 TMTC2Q8N394 836 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.34□□□□□ -1.55
CAST-237ENST00000512191 SMARCC2Q8TAQ2 1214 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 PPP1R13LQ8WUF5 828 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 TBC1D5Q92609 795 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 MTMR8Q96EF0 704 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 RRP36Q96EU6 259 aaKnown RBP5.34□□□□□ -1.55
CAST-237ENST00000512191 INPP4AQ96PE3 977 aaPredicted RBP5.34□□□□□ -1.55
CAST-237ENST00000512191 LZTS2Q9BRK4 669 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 LNPKQ9C0E8 428 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 CPVLQ9H3G5 476 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 RNPEPQ9H4A4 650 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 EHMT1Q9H9B1 1298 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 CLDND1Q9NY35 253 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 ERAP1Q9NZ08 941 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAST-237ENST00000512191 ST14Q9Y5Y6 855 aa5.34□□□□□ -1.55
CAST-237ENST00000512191 COL4A4P53420 1690 aaPredicted RBP5.34□□□□□ -1.56
CAST-237ENST00000512191 TRIP12Q14669 1992 aaPredicted RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 PIEZO1Q92508 2521 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 ADGRA3Q8IWK6 1321 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 FAM86C2PA6NEL3 165 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 H3BQ06 376 aaPredicted RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 IFIT3O14879 490 aaKnown RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 CBX7O95931 251 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 CTSHP09668 335 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 IL9P15248 144 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 ZNF200P98182 395 aaPredicted RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 SMAD4Q13485 552 aaKnown RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 BTG3Q14201 252 aaPredicted RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 WTAPQ15007 396 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 SMAD2Q15796 467 aaKnown RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 NKG7Q16617 165 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 FBLN7Q53RD9 439 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 TCEAL5Q5H9L2 206 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 TSHZ1Q6ZSZ6 1077 aa5.33□□□□□ -1.56
CAST-237ENST00000512191 MRPL41Q8IXM3 137 aaKnown RBP5.33□□□□□ -1.56
CAST-237ENST00000512191 SMC5Q8IY18 1101 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms