RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 HS2ST1Q7LGA3 356 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 RBM23Q86U06 439 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 NELFCDQ8IXH7 590 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 ELOA2Q8IYF1 753 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 SCFD1Q8WVM8 642 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 RABGGTAQ92696 567 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 HLA-CQ95604 372 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 FAM212AQ96EL1 285 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 KIF12Q96FN5 646 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 CDCA3Q99618 268 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 PAAF1Q9BRP4 392 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 FAM213AQ9BRX8 229 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 ZBP1Q9H171 429 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 PCIF1Q9H4Z3 704 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 TLE6Q9H808 572 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 KIAA1586Q9HCI6 787 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 CGNQ9P2M7 1197 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 CACNG4Q9UBN1 327 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 ADAM28Q9UKQ2 775 aa7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 PRRC2BQ5JSZ5 2229 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-215ENST00000511586 SF3B1O75533 1304 aaKnown RBP eCLIP7.78□□□□□ -1.166e-11■■■■■ 91.9
PDLIM5-215ENST00000511586 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 FSD2A1L4K1 749 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 C2orf71A6NGG8 1288 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 HIDE1A8MVS5 230 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 F8W810 466 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 PER2O15055 1255 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 TGFB1I1O43294 461 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 TRAPPC3O43617 180 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 EXTL3O43909 919 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 KINO60870 393 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 GADD45BO75293 160 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 PRPF40AO75400 957 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 KIF20AO95235 890 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 KIF4AO95239 1232 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 IL18RAPO95256 599 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 SMC2O95347 1197 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 EFEMP2O95967 443 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 CYP3A5P20815 502 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 CA8P35219 290 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 NRIP1P48552 1158 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 CLCNKBP51801 687 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 SOX4Q06945 474 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 ELAVL2Q12926 359 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 ZBTB6Q15916 424 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 DUSP6Q16828 381 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 CTC1Q2NKJ3 1217 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 JADE1Q6IE81 842 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 KIAA1841Q6NSI8 718 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 FUT10Q6P4F1 479 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 CRELD2Q6UXH1 353 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 EP400NLQ6ZTU2 488 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 TAS1R1Q7RTX1 841 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 ADGRD2Q7Z7M1 963 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 RNF168Q8IYW5 571 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 GPD1LQ8N335 351 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 EFHBQ8N7U6 833 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 KIAA0895Q8NCT3 520 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 BEST2Q8NFU1 509 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 GOLGA5Q8TBA6 731 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 HASPINQ8TF76 798 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 ATXN2LQ8WWM7 1075 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 C18orf25Q96B23 403 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 PABPC5Q96DU9 382 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 SAAL1Q96ER3 474 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 GSDMAQ96QA5 445 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 CBWD1Q9BRT8 395 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 HERC2P3Q9BVR0 1158 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 VN1R3Q9BXE9 311 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 EMILIN2Q9BXX0 1053 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 GTPBP4Q9BZE4 634 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 GPR62Q9BZJ7 368 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 IGFLR1Q9H665 355 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 ASB7Q9H672 318 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 GOLGA2P5Q9HBQ8 144 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 PRDM6Q9NQX0 595 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 MRPL17Q9NRX2 175 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 AGPAT3Q9NRZ7 376 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 RMND1Q9NWS8 449 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 UBQLN1Q9UMX0 589 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 DERAQ9Y315 318 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 PCDHGC5Q9Y5F6 944 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 IRAK3Q9Y616 596 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 KIAA1671Q9BY89 1806 aa7.77□□□□□ -1.17
PDLIM5-215ENST00000511586 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 GOLGA8IPA6NC78 632 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 ZNF233A6NK53 670 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 GOLGA8JA6NMD2 632 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 PODXLO00592 558 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 CLIC2O15247 247 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 LILRB3O75022 631 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 URODP06132 367 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 LRPAP1P30533 357 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 MCM4P33991 863 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 GTF2F1P35269 517 aaKnown RBP eCLIP7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 GLUD2P49448 558 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 MRPS5P82675 430 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 DSG1Q02413 1049 aa7.76□□□□□ -1.17
PDLIM5-215ENST00000511586 SPAG1Q07617 926 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms