RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ENKD1Q9H0I2 346 aa4.31□□□□□ -1.72
TRAPPC11-207ENST00000511409 C11orf54Q9H0W9 315 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-207ENST00000511409 SPON1Q9HCB6 807 aa4.31□□□□□ -1.72
TRAPPC11-207ENST00000511409 MSL2Q9HCI7 577 aa4.31□□□□□ -1.72
TRAPPC11-207ENST00000511409 PLA2G3Q9NZ20 509 aa4.31□□□□□ -1.72
TRAPPC11-207ENST00000511409 CALCOCO1Q9P1Z2 691 aa4.31□□□□□ -1.72
TRAPPC11-207ENST00000511409 STAP2Q9UGK3 403 aa4.31□□□□□ -1.72
TRAPPC11-207ENST00000511409 ZFR2Q9UPR6 939 aaKnown RBP4.31□□□□□ -1.72
TRAPPC11-207ENST00000511409 TCRBV7S2A1N4TA0A589 114 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 CFAP69A5D8W1 941 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 CAPN8A6NHC0 703 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 A6NNZ2 444 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 CXorf49A8MYA2 514 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 PRR5-ARHGAP8B1AHC4 643 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 B5MCH6 92 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 WNT10BO00744 389 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 TPP1O14773 563 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 KIAA0391O15091 583 aaKnown RBP4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 MFAP3LO75121 409 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 CD1AP06126 327 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 SNRPA1P09661 255 aaKnown RBP4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 CLRN1P58418 232 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 HHEXQ03014 270 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 FGL2Q14314 439 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 MAP9Q49MG5 647 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 FLYWCH1Q4VC44 716 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 COBLL1Q53SF7 1204 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 TCTN3Q6NUS6 607 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 ZNF529Q6P280 563 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 UBE3BQ7Z3V4 1068 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 SRGAP1Q7Z6B7 1085 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 FAM83AQ86UY5 434 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 ELOA2Q8IYF1 753 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 FUKQ8N0W3 1084 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 FAM156AQ8NDB6 213 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 SLC35B2Q8TB61 432 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 TFAP2CQ92754 450 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 PHACTR3Q96KR7 559 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 LRFN3Q9BTN0 628 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 SSBP3Q9BWW4 388 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 TMEM60Q9H2L4 133 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 ARNT2Q9HBZ2 717 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 SLAMF7Q9NQ25 335 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 CNNM1Q9NRU3 951 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 PNPOQ9NVS9 261 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 POGKQ9P215 609 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 CPA4Q9UI42 421 aa4.3□□□□□ -1.72
TRAPPC11-207ENST00000511409 ATRNL1Q5VV63 1379 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 TBKBP1A7MCY6 615 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 GRM6O15303 877 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 RAD17O75943 681 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 IPO13O94829 963 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 MAP4K4O95819 1239 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 ZBED1O96006 694 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 MTHFD1P11586 935 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 TYRP14679 529 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 HK1P19367 917 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 CACNB3P54284 484 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 USP14P54578 494 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 RAB1AP62820 205 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 PLP2Q04941 152 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 FOXL1Q12952 345 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 DUSP8Q13202 625 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 PLS1Q14651 629 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 CNN3Q15417 329 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 EFCAB12Q6NXP0 572 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 DARS2Q6PI48 645 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 CHST15Q7LFX5 561 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 SGMS1Q86VZ5 419 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 PLXDC1Q8IUK5 500 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 GSPT2Q8IYD1 628 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 RNF169Q8NCN4 708 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 BRIX1Q8TDN6 353 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 TNPO1Q92973 898 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 FAM167AQ96KS9 214 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 MPHOSPH9Q99550 1183 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 BDH2Q9BUT1 245 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 SARGQ9BW04 601 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 KCNH6Q9H252 994 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 WDCPQ9H6R7 721 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 SARS2Q9NP81 518 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 GNL3LQ9NVN8 582 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 PCDHA6Q9UN73 950 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 SH3BP1Q9Y3L3 701 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 PCDHGB6Q9Y5F9 930 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 PCDHA1Q9Y5I3 950 aa4.29□□□□□ -1.72
TRAPPC11-207ENST00000511409 A0A1W2PPL8 197 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 CAPN14A8MX76 684 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 F2RL2O00254 374 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 GPR42O15529 346 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 PJA2O43164 708 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 FOXS1O43638 330 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 POMCP01189 267 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 GNAI3P08754 354 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 SBK3P0C264 359 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 ALAS1P13196 640 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 TRIM27P14373 513 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 RHCEP18577 417 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 AGFG1P52594 562 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 GNAI1P63096 354 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms