RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	GLUD1	P00367	558 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	ADRB2	P07550	413 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	WEE2	P0C1S8	567 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	C7	P10643	843 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	PDIA4	P13667	645 aa	Known RBP	13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	MARCKS	P29966	332 aa	Predicted RBP	13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	NASP	P49321	788 aa	Predicted RBP	13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	CLCNKB	P51801	687 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	YARS	P54577	528 aa	Known RBP	13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	GTF2B	Q00403	316 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	SOX4	Q06945	474 aa	Predicted RBP	13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	FAM171A1	Q5VUB5	890 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZBTB33	Q86T24	672 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	SLC39A7	Q92504	469 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	LARP4B	Q92615	738 aa	Known RBP	13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	DDX27	Q96GQ7	796 aa	Known RBP	13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	SNX27	Q96L92	541 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	USP28	Q96RU2	1077 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	PLEKHA5	Q9HAU0	1116 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	PARVG	Q9HBI0	331 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	SLC38A7	Q9NVC3	462 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	STK17A	Q9UEE5	414 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	TBX20	Q9UMR3	447 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	VWA8	A3KMH1	1905 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	DENND4A	Q7Z401	1863 aa		13.27	□□□□□ -0.28
CLDND1-223	ENST00000511081	C2orf16	Q68DN1	1984 aa		13.27	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZNF318	Q5VUA4	2279 aa		13.27	□□□□□ -0.28
CLDND1-223	ENST00000511081	CCDC195	A0A1B0GUA6	201 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	TTC26	A0AVF1	554 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	C2CD4D	B7Z1M9	353 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	TRAK2	O60296	914 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	FAM189A1	O60320	539 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	B3GAT3	O94766	335 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	RPL9	P32969	192 aa	Known RBP	13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	ABCD1	P33897	745 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	DHX8	Q14562	1220 aa	Known RBP	13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	ZBTB6	Q15916	424 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	PTPN21	Q16825	1174 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	GLRA4	Q5JXX5	417 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	SPECC1	Q5M775	1068 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	PDXDC1	Q6P996	788 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	TRIM67	Q6ZTA4	783 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	PALB2	Q86YC2	1186 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	PLCD3	Q8N3E9	789 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	MYCT1	Q8N699	235 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	C3orf58	Q8NDZ4	430 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	ZNF707	Q96C28	371 aa	Predicted RBP	13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	CLIC6	Q96NY7	704 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	STRA6	Q9BX79	667 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	MAN1C1	Q9NR34	630 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	RAPGEFL1	Q9UHV5	662 aa		13.27	□□□□□ -0.29
CLDND1-223	ENST00000511081	TRAPPC3	O43617	180 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	FAM13A	O94988	1023 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	CLTA	P09496	248 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	RPL17	P18621	184 aa	Known RBP	13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	OSTN	P61366	133 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	RAB33A	Q14088	237 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	KYAT1	Q16773	422 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	ELMSAN1	Q6PJG2	1045 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	LINC00301	Q8NCQ3	95 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	KREMEN2	Q8NCW0	462 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	HASPIN	Q8TF76	798 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	DNAJC19	Q96DA6	116 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	TSPAN18	Q96SJ8	248 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	GOLGA2P5	Q9HBQ8	144 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	WDR6	Q9NNW5	1121 aa	Known RBP	13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	ZDHHC7	Q9NXF8	308 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	CCDC39	Q9UFE4	941 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	BACE2	Q9Y5Z0	518 aa		13.26	□□□□□ -0.29
CLDND1-223	ENST00000511081	MUC6	Q6W4X9	2439 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	ZDBF2	Q9HCK1	2354 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	PDCD11	Q14690	1871 aa	Known RBP	13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081		A0A0B4J269	797 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	TBC1D4	O60343	1298 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	RFPL2	O75678	378 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	ZMYND10	O75800	440 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	SPATA31D3	P0C874	917 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	CEBPZ	Q03701	1054 aa	Known RBP	13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	SIGLEC14	Q08ET2	396 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	MRPL58	Q14197	206 aa	Known RBP	13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	PSMD5	Q16401	504 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	RRAGB	Q5VZM2	374 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	SLC39A4	Q6P5W5	647 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	SPATA31D4	Q6ZUB0	917 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	HFE2	Q6ZVN8	426 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	RTL10	Q7L3V2	364 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	ZNF720	Q7Z2F6	126 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	MAP4K3	Q8IVH8	894 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	KRI1	Q8N9T8	703 aa	Known RBP	13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	ASIC4	Q96FT7	647 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	PRKD2	Q9BZL6	878 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	MTRR	Q9UBK8	725 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	FBXW11	Q9UKB1	542 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081	STYXL1	Q9Y6J8	313 aa		13.25	□□□□□ -0.29
CLDND1-223	ENST00000511081		A0A087X0B3	334 aa		13.24	□□□□□ -0.29
CLDND1-223	ENST00000511081	TMEM221	A6NGB7	291 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms