RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 ERVK-21P61565 698 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 SOX4Q06945 474 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-227ENST00000510951 DSC1Q08554 894 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 TUSC3Q13454 348 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 TMEM132DQ14C87 1099 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 EPC2Q52LR7 807 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 XKR4Q5GH76 650 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 LMBRD2Q68DH5 695 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-227ENST00000510951 ANKRD40Q6AI12 368 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 KCNT2Q6UVM3 1135 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 ALKAL1Q6UXT8 129 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 Q7L0L9 218 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 TMEM173Q86WV6 379 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-227ENST00000510951 EFCAB13Q8IY85 973 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 COLGALT2Q8IYK4 626 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 FBXO22Q8NEZ5 403 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 HASPINQ8TF76 798 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 RSPH1Q8WYR4 309 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 CLP1Q92989 425 aaKnown RBP11.3□□□□□ -0.6
NR1I3-227ENST00000510951 DHTKD1Q96HY7 919 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-227ENST00000510951 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 PAAF1Q9BRP4 392 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 AAASQ9NRG9 546 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 CHD9Q3L8U1 2897 aa11.3□□□□□ -0.6
NR1I3-227ENST00000510951 CDH23Q9H251 3354 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 BICDL2A1A5D9 508 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 RFXAPO00287 272 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 IL18RAPO95256 599 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 DLATP10515 647 aaKnown RBP11.29□□□□□ -0.6
NR1I3-227ENST00000510951 BMPR1AP36894 532 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 ALDH7A1P49419 539 aaKnown RBP11.29□□□□□ -0.6
NR1I3-227ENST00000510951 LRRC63Q05C16 580 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 CYP24A1Q07973 514 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 NAB2Q15742 525 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 EDRF1Q3B7T1 1238 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 TTI2Q6NXR4 508 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 MLKLQ8NB16 471 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 BCL7CQ8WUZ0 217 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-227ENST00000510951 CCDC127Q96BQ5 260 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 FBXL18Q96ME1 805 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 PRDM12Q9H4Q4 367 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 KIAA1586Q9HCI6 787 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 SLC38A7Q9NVC3 462 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 DMAC2Q9NW81 257 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 FRMD4BQ9Y2L6 1034 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 PCDHB12Q9Y5F1 795 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 PTPRJQ12913 1337 aa11.29□□□□□ -0.6
NR1I3-227ENST00000510951 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 SYCE3A1L190 88 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 NRP1O14786 923 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 ABCB7O75027 752 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 AKAP3O75969 853 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 FGF18O76093 207 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 KIF4AO95239 1232 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 GALTP07902 379 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
NR1I3-227ENST00000510951 CLCNKBP51801 687 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 TFAMQ00059 246 aaKnown RBP11.28□□□□□ -0.6
NR1I3-227ENST00000510951 TYRO3Q06418 890 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 ADAM9Q13443 819 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 GRIN2CQ14957 1233 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 STX1AQ16623 288 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 NFIL3Q16649 462 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 SKOR2Q2VWA4 1001 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-227ENST00000510951 C11orf57Q6ZUT1 292 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-227ENST00000510951 FAM186BQ8IYM0 893 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 SLC39A11Q8N1S5 342 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 SAMD11Q96NU1 681 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
NR1I3-227ENST00000510951 TMEM175Q9BSA9 504 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 C11orf84Q9BUA3 381 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-227ENST00000510951 MTMR12Q9C0I1 747 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 ASB7Q9H672 318 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
NR1I3-227ENST00000510951 MARCH5Q9NX47 278 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 SPG21Q9NZD8 308 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 DACH1Q9UI36 760 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 UBQLN1Q9UMX0 589 aaKnown RBP11.28□□□□□ -0.6
NR1I3-227ENST00000510951 FAN1Q9Y2M0 1017 aa11.28□□□□□ -0.6
NR1I3-227ENST00000510951 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
NR1I3-227ENST00000510951 C5orf67F2Z3F1 127 aa11.27□□□□□ -0.61
NR1I3-227ENST00000510951 PODXLO00592 558 aa11.27□□□□□ -0.61
NR1I3-227ENST00000510951 PPEF2O14830 753 aa11.27□□□□□ -0.61
NR1I3-227ENST00000510951 CETN3O15182 167 aa11.27□□□□□ -0.61
NR1I3-227ENST00000510951 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.61
NR1I3-227ENST00000510951 ITGB1P05556 798 aa11.27□□□□□ -0.61
NR1I3-227ENST00000510951 TMEM191BP0C7N4 346 aa11.27□□□□□ -0.61
NR1I3-227ENST00000510951 EPB41P11171 864 aaKnown RBP11.27□□□□□ -0.61
NR1I3-227ENST00000510951 IGFBP6P24592 240 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-227ENST00000510951 PPM1AP35813 382 aa11.27□□□□□ -0.61
NR1I3-227ENST00000510951 PSMC2P35998 433 aaKnown RBP11.27□□□□□ -0.61
NR1I3-227ENST00000510951 FKBP3Q00688 224 aaKnown RBP11.27□□□□□ -0.61
NR1I3-227ENST00000510951 GPM6BQ13491 265 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms