RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 LSM14BQ9BX40 385 aaKnown RBP11.05□□□□□ -0.64
NEK1-205ENST00000510108 TMEM117Q9H0C3 514 aa11.05□□□□□ -0.64
NEK1-205ENST00000510108 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
NEK1-205ENST00000510108 SIX2Q9NPC8 291 aa11.05□□□□□ -0.64
NEK1-205ENST00000510108 TRMT13Q9NUP7 481 aaKnown RBP11.05□□□□□ -0.64
NEK1-205ENST00000510108 GCNT4Q9P109 453 aa11.05□□□□□ -0.64
NEK1-205ENST00000510108 CEP72Q9P209 647 aa11.05□□□□□ -0.64
NEK1-205ENST00000510108 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEK1-205ENST00000510108 PDCD11Q14690 1871 aaKnown RBP11.05□□□□□ -0.64
NEK1-205ENST00000510108 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 EPHB6O15197 1021 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 B4GALT4O60513 344 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 IL18RAPO95256 599 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 CD4P01730 458 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 CHRNA1P02708 482 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 CLTAP09496 248 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 TRIM21P19474 475 aaKnown RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 HNRNPH3P31942 346 aaKnown RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 TNFSF9P41273 254 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 MATR3P43243 847 aaKnown RBP eCLIP11.04□□□□□ -0.64
NEK1-205ENST00000510108 KCNJ6P48051 423 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 ZBED6P86452 979 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 NCBP1Q09161 790 aaKnown RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 CETN1Q12798 172 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 ENOX2Q16206 610 aaKnown RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 ZACNQ401N2 412 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 KLHDC7AQ5VTJ3 777 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 TRIM65Q6PJ69 517 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 TRAF7Q6Q0C0 670 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 FAM43BQ6ZT52 329 aaPredicted RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 ZBTB33Q86T24 672 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 FAM126BQ8IXS8 530 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 CEP120Q8N960 986 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 NEK11Q8NG66 645 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 BAP1Q92560 729 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 RNF166Q96A37 237 aaPredicted RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 HTATIP2Q9BUP3 242 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 NAA15Q9BXJ9 866 aaKnown RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 ABHD10Q9NUJ1 306 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 MYO6Q9UM54 1294 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 ZKSCAN5Q9Y2L8 839 aa11.04□□□□□ -0.64
NEK1-205ENST00000510108 NOC2LQ9Y3T9 749 aaKnown RBP11.04□□□□□ -0.64
NEK1-205ENST00000510108 KIAA0100Q14667 2235 aaKnown RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 PTPRJQ12913 1337 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 MROH7Q68CQ1 1323 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 MEFVO15553 781 aaPredicted RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 ZC3H11AO75152 810 aaKnown RBP eCLIP11.03□□□□□ -0.64
NEK1-205ENST00000510108 C4BPAP04003 597 aaKnown RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 HARSP12081 509 aaKnown RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 COL6A1P12109 1028 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 SLC9A1P19634 815 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 FGFR4P22455 802 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 THPOP40225 353 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 GCLMP48507 274 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 ADKP55263 362 aaKnown RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 MEA1Q16626 185 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 FBXO47Q5MNV8 452 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 UBXN11Q5T124 520 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 NT5DC4Q86YG4 428 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 CD302Q8IX05 232 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 EHBP1Q8NDI1 1231 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 ZNF516Q92618 1163 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 SYN2Q92777 582 aaPredicted RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 FNBP1Q96RU3 617 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 CRACR2AQ9BSW2 395 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 TRAIPQ9BWF2 469 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 INTS2Q9H0H0 1204 aaKnown RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 NUCKS1Q9H1E3 243 aaKnown RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 ASB7Q9H672 318 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 C11orf49Q9H6J7 331 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 MMRN2Q9H8L6 949 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 PDE11AQ9HCR9 933 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 ERVK-5Q9HDB9 667 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 CHST12Q9NRB3 414 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 TOPORSQ9NS56 1045 aaPredicted RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 FAM207AQ9NSI2 230 aaPredicted RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 NOD1Q9Y239 953 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 GINS2Q9Y248 185 aa11.03□□□□□ -0.64
NEK1-205ENST00000510108 LUC7L2Q9Y383 392 aaKnown RBP11.03□□□□□ -0.64
NEK1-205ENST00000510108 TLR3O15455 904 aaKnown RBP11.02□□□□□ -0.65
NEK1-205ENST00000510108 RPS6KA5O75582 802 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 STAG3L1P0CL83 205 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 DLATP10515 647 aaKnown RBP11.02□□□□□ -0.65
NEK1-205ENST00000510108 CKBP12277 381 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 UCHL3P15374 230 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 KRT9P35527 623 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 JAM2P57087 298 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 CDK17Q00537 523 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 LRMPQ12912 555 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 PDXDC1Q6P996 788 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 SV2AQ7L0J3 742 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 ANKRD33Q7Z3H0 272 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.65
NEK1-205ENST00000510108 CDR2LQ86X02 465 aaPredicted RBP11.02□□□□□ -0.65
NEK1-205ENST00000510108 THNSL1Q8IYQ7 743 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms