RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 FGFR4P22455 802 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 OAZ1P54368 228 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 C6orf89Q6UWU4 347 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 CCDC121Q6ZUS5 278 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 SLCO2A1Q92959 643 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 CABS1Q96KC9 395 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 XPO6Q96QU8 1125 aaKnown RBP19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 SELENOSQ9BQE4 189 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 PDGFDQ9GZP0 370 aaPredicted RBP19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 C5orf60A6NFR6 353 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 EGFRP00533 1210 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 TNNI1P19237 187 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 MAN1A1P33908 653 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 NSFP46459 744 aaKnown RBP19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 STRN3Q13033 797 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 DRP2Q13474 957 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 GNPTABQ3T906 1256 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 ERMARDQ5T6L9 678 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 GKAP1Q5VSY0 366 aaPredicted RBP19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 DCAF15Q66K64 600 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 MIS18BP1Q6P0N0 1132 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 C15orf39Q6ZRI6 1047 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 CCDC60Q8IWA6 550 aaPredicted RBP19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 CACNA2D3Q8IZS8 1091 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 MDM1Q8TC05 714 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 MMP13P45452 471 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 ACTR2P61160 394 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 KRT17Q04695 432 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 PSMD6Q15008 389 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 TAS1R3Q7RTX0 852 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 CCDC25Q86WR0 208 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 C1orf54Q8WWF1 131 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 CHMP6Q96FZ7 201 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 SEC16BQ96JE7 1060 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 WHRNQ9P202 907 aa19.16■□□□□ 0.66
CCHCR1-228ENST00000509552 STAM2O75886 525 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 CHN1P15882 459 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 RPS12P25398 132 aaKnown RBP19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 PIK3CAP42336 1068 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 QPCTQ16769 361 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 XKR3Q5GH77 459 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 ABHD15Q6UXT9 468 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 SYDE1Q6ZW31 735 aaPredicted RBP19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 TRMT10CQ7L0Y3 403 aaKnown RBP19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 SCYL3Q8IZE3 742 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 ZNF280CQ8ND82 737 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 GRK7Q8WTQ7 553 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 CPA5Q8WXQ8 436 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 ZNF516Q92618 1163 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 PICK1Q9NRD5 415 aa19.15■□□□□ 0.66
CCHCR1-228ENST00000509552 MROH7Q68CQ1 1323 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 MYPNQ86TC9 1320 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 RASGRF2O14827 1237 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 RGS20O76081 388 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 CALCAP01258 141 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 RRM1P23921 792 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 CLDN10P78369 228 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 MTERF2Q49AM1 385 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 REPS2Q8NFH8 660 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 UHMK1Q8TAS1 419 aaKnown RBP19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 KAT2BQ92831 832 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 PIM2Q9P1W9 311 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 ASIC3Q9UHC3 531 aa19.14■□□□□ 0.66
CCHCR1-228ENST00000509552 HLA-DRAP01903 254 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 POTEJP0CG39 1038 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 ITIH2P19823 946 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 DSG3P32926 999 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 POLGP54098 1239 aaPredicted RBP19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 SNX1Q13596 522 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 LLGL1Q15334 1064 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 ZACNQ401N2 412 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 NBPF12Q5TAG4 269 aaPredicted RBP19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 LIN9Q5TKA1 542 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 LMBRD2Q68DH5 695 aaPredicted RBP19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 ROPN1BQ9BZX4 212 aaPredicted RBP19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 ROPN1Q9HAT0 212 aaPredicted RBP19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 HACL1Q9UJ83 578 aa19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 AGO2Q9UKV8 859 aaKnown RBP19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 ZNFX1Q9P2E3 1918 aaKnown RBP19.14■□□□□ 0.65
CCHCR1-228ENST00000509552 GOLGA6L7A0A1B0GV03 622 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 CENPCQ03188 943 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 MMS22LQ6ZRQ5 1243 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 TAOK1Q7L7X3 1001 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 CNPY4Q8N129 248 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 EPS8L3Q8TE67 593 aaKnown RBP19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 ARID2Q68CP9 1835 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 GAS8O95995 478 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 CYP1A1P04798 512 aaPredicted RBP19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 DRD4P21917 467 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 IFI35P80217 286 aaPredicted RBP19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 EMC2Q15006 297 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 FBXW10Q5XX13 1052 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 ACAD9Q9H845 621 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 CYP39A1Q9NYL5 469 aa19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 ZNF214Q9UL59 606 aaPredicted RBP19.13■□□□□ 0.65
CCHCR1-228ENST00000509552 WDR81Q562E7 1941 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 SPATA31C2B4DYI2 1134 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 SORBS3O60504 671 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 C4BPAP04003 597 aaKnown RBP19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 SUPT20HL2P0C7V6 817 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms