RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GLUD2P49448 558 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 ASIC1P78348 528 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 DSC1Q08554 894 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 STK4Q13043 487 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 TUSC3Q13454 348 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 PTPN14Q15678 1187 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 SEZ6Q53EL9 994 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 ELMSAN1Q6PJG2 1045 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 TMEM184AQ6ZMB5 413 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 UNC13DQ70J99 1090 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 ZNF720Q7Z2F6 126 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 HAUS6Q7Z4H7 955 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 MYCT1Q8N699 235 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 GSTCDQ8NEC7 633 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 SPATA20Q8TB22 786 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 ACO2Q99798 780 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 HERC2P3Q9BVR0 1158 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 ST6GALNAC4Q9H4F1 302 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 PANK4Q9NVE7 773 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 DZANK1Q9NVP4 752 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 LARSQ9P2J5 1176 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 TNFSF13BQ9Y275 285 aa9.56□□□□□ -0.88
PDLIM5-213ENST00000509357 F8W810 466 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 H0YCG3 227 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 K7ENM7 598 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 TGFB1I1O43294 461 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 ADH1AP07327 375 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 CNPP09543 421 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 IDEP14735 1019 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 EPCAMP16422 314 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 SP100P23497 879 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 UBE2HP62256 183 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 ITIH3Q06033 890 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 HSP90AA2PQ14568 343 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 CBX2Q14781 532 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 USP41Q3LFD5 358 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 GLRA4Q5JXX5 417 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 TMEM31Q5JXX7 168 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 RARS2Q5T160 578 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 SYCE2Q6PIF2 218 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 TAS1R1Q7RTX1 841 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 CEP57Q86XR8 500 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 MAP4K3Q8IVH8 894 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 SMYD4Q8IYR2 804 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 C12orf76Q8N812 135 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 HASPINQ8TF76 798 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 SCFD1Q8WVM8 642 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 RIN2Q8WYP3 895 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 FAM84AQ96KN4 292 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 RIPOR3Q96MK2 946 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 KLHL5Q96PQ7 755 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 PHF7Q9BWX1 381 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 VN1R3Q9BXE9 311 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 CDT1Q9H211 546 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 MAGEF1Q9HAY2 307 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 SLC39A2Q9NP94 309 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 OLFML3Q9NRN5 406 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 TOPORSQ9NS56 1045 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 MARCH5Q9NX47 278 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 ANKFY1Q9P2R3 1169 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 CACNG4Q9UBN1 327 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 DPP7Q9UHL4 492 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 ADAM28Q9UKQ2 775 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 TBX20Q9UMR3 447 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 IRAK3Q9Y616 596 aa9.55□□□□□ -0.88
PDLIM5-213ENST00000509357 SF3B1O75533 1304 aaKnown RBP eCLIP9.55□□□□□ -0.886e-11■■■■■ 91.9
PDLIM5-213ENST00000509357 FAM86C2PA6NEL3 165 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 PI4K2BG5E9Z4 385 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 TULP1O00294 542 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 CLDN3O15551 220 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 DCXO43602 365 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 PIGRP01833 764 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 RPN1P04843 607 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 WEE2P0C1S8 567 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 MCF2P10911 925 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 CD44P16070 742 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 TNFSF9P41273 254 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 GRM5P41594 1212 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 MTHFRP42898 656 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 LIG4P49917 911 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 KCNC3Q14003 757 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 POSTNQ15063 836 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 HERC4Q5GLZ8 1057 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 ATAT1Q5SQI0 421 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 MPZL3Q6UWV2 235 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 TMC5Q6UXY8 1006 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 RNF135Q8IUD6 432 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 GLYCTKQ8IVS8 523 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 KHSRPQ92945 711 aaKnown RBP eCLIP9.54□□□□□ -0.881e-6■■■■□ 21
PDLIM5-213ENST00000509357 B3GALT6Q96L58 329 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 FBXL18Q96ME1 805 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 NECTIN4Q96NY8 510 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 ACAP3Q96P50 834 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 S1PR5Q9H228 398 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 ADAM7Q9H2U9 754 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 VWA8A3KMH1 1905 aa9.54□□□□□ -0.88
PDLIM5-213ENST00000509357 PTGESO14684 152 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms