RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SLC10A6Q3KNW5 377 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 ZACNQ401N2 412 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 CBWD6Q4V339 395 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 CBWD3Q5JTY5 395 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 CBWD5Q5RIA9 395 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 C1orf220Q5T0J3 134 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 TMC6Q7Z403 805 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 MRPL10Q7Z7H8 261 aaKnown RBP11.23□□□□□ -0.61
RFC1-211ENST00000509084 NEK11Q8NG66 645 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 PLEKHO2Q8TD55 490 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 ADAM2Q99965 735 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 IMPG2Q9BZV3 1241 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 WNT8AQ9H1J5 351 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 MMRN2Q9H8L6 949 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 PLCB1Q9NQ66 1216 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 GCNT4Q9P109 453 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 CNTN3Q9P232 1028 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 PARP2Q9UGN5 583 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 COQ4Q9Y3A0 265 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 UMODL1Q5DID0 1318 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 CITO14578 2027 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 MGEA5O60502 916 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 EFCAB14O75071 495 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 ZC3H11AO75152 810 aaKnown RBP eCLIP11.22□□□□□ -0.61
RFC1-211ENST00000509084 EOMESO95936 686 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 CYP2C18P33260 490 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 GCLMP48507 274 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 CCL23P55773 120 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 BIRC3Q13489 604 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 EPC2Q52LR7 807 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 CNKSR3Q6P9H4 555 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 C15orf39Q6ZRI6 1047 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 SV2AQ7L0J3 742 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 PPFIBP1Q86W92 1011 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 TMEM192Q8IY95 271 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 SMG8Q8ND04 991 aaKnown RBP11.22□□□□□ -0.61
RFC1-211ENST00000509084 FBXL13Q8NEE6 735 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 DBF4BQ8NFT6 615 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 FAM81BQ96LP2 452 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 RPS6KC1Q96S38 1066 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 EDEM3Q9BZQ6 932 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 ELAC1Q9H777 363 aaKnown RBP11.22□□□□□ -0.61
RFC1-211ENST00000509084 PRDM5Q9NQX1 630 aaPredicted RBP11.22□□□□□ -0.61
RFC1-211ENST00000509084 SLC38A7Q9NVC3 462 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 FBXL5Q9UKA1 691 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 UBQLN1Q9UMX0 589 aaKnown RBP11.22□□□□□ -0.61
RFC1-211ENST00000509084 SIK3Q9Y2K2 1263 aa11.22□□□□□ -0.61
RFC1-211ENST00000509084 R3HCC1Q9Y3T6 440 aaKnown RBP11.22□□□□□ -0.61
RFC1-211ENST00000509084 ANK1P16157 1881 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 A0A1W2PQJ5 194 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 LACTBL1A8MY62 500 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 C9IYK1 514 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 HOXA2O43364 376 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 NRDCO43847 1150 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 PHACTR2O75167 634 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 C4BPAP04003 597 aaKnown RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 PTMAP06454 111 aaKnown RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 KCNE1P15382 129 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 PIK3CAP42336 1068 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 TFAMQ00059 246 aaKnown RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 GPNMBQ14956 572 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 TDRD10Q5VZ19 366 aaKnown RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 SMYD5Q6GMV2 418 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 JADE1Q6IE81 842 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 MFSD5Q6N075 450 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 TRIM65Q6PJ69 517 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 ALKAL1Q6UXT8 129 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 ECHDC2Q86YB7 292 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 CNGA4Q8IV77 575 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 FMNL3Q8IVF7 1028 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 EFCAB13Q8IY85 973 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 RPUSD2Q8IZ73 545 aaKnown RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 BEST2Q8NFU1 509 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 SCLYQ96I15 445 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 APOL6Q9BWW8 343 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 LSM14BQ9BX40 385 aaKnown RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 INTS2Q9H0H0 1204 aaKnown RBP11.21□□□□□ -0.61
RFC1-211ENST00000509084 RSAD1Q9HA92 442 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 RAB20Q9NX57 234 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 TMEM161AQ9NX61 479 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.61
RFC1-211ENST00000509084 NFICP08651 508 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 ACTN1P12814 892 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 CYP3A5P20815 502 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 AKAP5P24588 427 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 PON1P27169 355 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 WNT7BP56706 349 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 FAM189BP81408 668 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 TBX2Q13207 712 aaPredicted RBP11.2□□□□□ -0.62
RFC1-211ENST00000509084 TRPC3Q13507 836 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 NCOA4Q13772 614 aa11.2□□□□□ -0.62
RFC1-211ENST00000509084 IKBKEQ14164 716 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms