RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 MAP7D2Q96T17 732 aa9.7□□□□□ -0.86
COL4A3BP-206ENST00000508809 APOL5Q9BWW9 433 aa9.7□□□□□ -0.86
COL4A3BP-206ENST00000508809 CHST12Q9NRB3 414 aa9.7□□□□□ -0.86
COL4A3BP-206ENST00000508809 DACT1Q9NYF0 836 aa9.7□□□□□ -0.86
COL4A3BP-206ENST00000508809 AKT3Q9Y243 479 aa9.7□□□□□ -0.86
COL4A3BP-206ENST00000508809 EP300Q09472 2414 aaPredicted RBP9.7□□□□□ -0.86
COL4A3BP-206ENST00000508809 IGKV6-21A0A0C4DH24 114 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 WDR64B1ANS9 1081 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 MSTNO14793 375 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 ZBTB39O15060 712 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 MMP20O60882 483 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 MPSTP25325 297 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 GNA11P29992 359 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 NBL1P41271 181 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 CLCN5P51795 746 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 POLGP54098 1239 aaPredicted RBP9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 BMS1Q14692 1282 aaKnown RBP9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 ADCK5Q3MIX3 580 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 PRR16Q569H4 304 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 ATAT1Q5SQI0 421 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 KIAA1841Q6NSI8 718 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 TRMT1LQ7Z2T5 733 aaKnown RBP9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 LRRC71Q8N4P6 559 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 TMEM105Q8N8V8 129 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 SLC22A17Q8WUG5 538 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 SPACA7Q96KW9 195 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 TCEANC2Q96MN5 208 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 CEP89Q96ST8 783 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 MRPL9Q9BYD2 267 aaKnown RBP9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 ZBP1Q9H171 429 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 C6orf50Q9HD87 102 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 ANO2Q9NQ90 1003 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 DISC1Q9NRI5 854 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 NAGPAQ9UK23 515 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 ZNF292O60281 2723 aa9.69□□□□□ -0.86
COL4A3BP-206ENST00000508809 KLF18A0A0U1RQI7 1052 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 GOLGA8AA7E2F4 631 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 GOLGA8BA8MQT2 603 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 NT5C1B-RDH14C9J2C7 533 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 PRPF3O43395 683 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 ZNF623O75123 536 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 STBD1O95210 358 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 GALTP07902 379 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 CTSAP10619 480 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 NID1P14543 1247 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 SP100P23497 879 aaPredicted RBP9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 SCNN1AP37088 669 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 EIF1AXP47813 144 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 USP11P51784 963 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 DNM1Q05193 864 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 GIT2Q14161 759 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 ASCL5Q7RTU5 278 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 DDX53Q86TM3 631 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 VPS52Q8N1B4 723 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 REXO1Q8N1G1 1221 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 FBXL16Q8N461 479 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 CCDC12Q8WUD4 166 aaPredicted RBP9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 EDEM1Q92611 657 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 SLC5A5Q92911 643 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 TMEM169Q96HH4 297 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 IGSF21Q96ID5 467 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 NSUN5Q96P11 429 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 NACC1Q96RE7 527 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 RIT2Q99578 217 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 FRYLO94915 3013 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 DENND4AQ7Z401 1863 aa9.68□□□□□ -0.86
COL4A3BP-206ENST00000508809 DMXL1Q9Y485 3027 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 KRBA1A5PL33 1030 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 PRR23AA6NEV1 266 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 MSH4O15457 936 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 CSDE1O75534 798 aaKnown RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 ASGR2P07307 311 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 HMGB1P09429 215 aaKnown RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 FGFR4P22455 802 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 MZF1P28698 734 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 SFNP31947 248 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 METAP2P50579 478 aaKnown RBP eCLIP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 PRKCEQ02156 737 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 DRP2Q13474 957 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 KRT32Q14532 448 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 NTRK3Q16288 839 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 PERM1Q5SV97 790 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 RARS2Q5T160 578 aaKnown RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 B3GNT9Q6UX72 402 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 ZNF438Q7Z4V0 828 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 TMEM173Q86WV6 379 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 C12orf76Q8N812 135 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 TDRD5Q8NAT2 981 aaKnown RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 RNF169Q8NCN4 708 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 RDM1Q8NG50 284 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 BICD2Q8TD16 824 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 KCNB2Q92953 911 aa9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 ZNF668Q96K58 619 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 GCOM2Q9BZD3 368 aaPredicted RBP9.67□□□□□ -0.86
COL4A3BP-206ENST00000508809 SMOC2Q9H3U7 446 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms