RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 NDUFS2O75306 463 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 KATNA1O75449 491 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 COL10A1Q03692 680 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 CPEB3Q8NE35 698 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 OR56A1Q8NGH5 318 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 C7orf25Q9BPX7 421 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 SERHL2Q9H4I8 314 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 KLHL11Q9NVR0 708 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 FBXO34Q9NWN3 711 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 ANKFY1Q9P2R3 1169 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 INTUQ9ULD6 942 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 FPGT-TNNI3KV9GXZ4 949 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 TEX33O43247 280 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 ELANEP08246 267 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 MYBL2P10244 700 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 PROZP22891 400 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 SLC6A2P23975 617 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 ITKQ08881 620 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 FSTL1Q12841 308 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 FAM50AQ14320 339 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 UBXN2BQ14CS0 331 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 ZNF529Q6P280 563 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 MTMR8Q96EF0 704 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 FUBP3Q96I24 572 aaKnown RBP eCLIP7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 MANSC1Q9H8J5 431 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 RUVBL1Q9Y265 456 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 MAP3K2Q9Y2U5 619 aa7.12□□□□□ -1.27
TOPBP1-206ENST00000508524 MYBBP1AQ9BQG0 1328 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 POMCP01189 267 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 CFIP05156 583 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 DDCP20711 480 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 DDX6P26196 483 aaKnown RBP eCLIP7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 ZEB1P37275 1124 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 EVA1CP58658 441 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 KRT85P78386 507 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 RHOT1Q8IXI2 618 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 WDR11Q9BZH6 1224 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 ATP11BQ9Y2G3 1177 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 COL4A3Q01955 1670 aa7.11□□□□□ -1.27
TOPBP1-206ENST00000508524 UNC119BA6NIH7 251 aa7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 B3GALT2O43825 422 aa7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 PRSS23O95084 383 aa7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 GCSHP23434 173 aa7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 TARDBPQ13148 414 aaKnown RBP eCLIP7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 ACAP2Q15057 778 aa7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 PCBP2Q15366 365 aaKnown RBP eCLIP7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 TSHZ3Q63HK5 1081 aa7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 Q6YL49 198 aa7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 UBE3BQ7Z3V4 1068 aa7.1□□□□□ -1.27
TOPBP1-206ENST00000508524 SHTN1A0MZ66 631 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 CCDC78A2IDD5 438 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 KLHL33A6NCF5 533 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 ALG1L2C9J202 215 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 XPOTO43592 962 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 SPDEFO95238 335 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 GCP02774 474 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 HLA-DOAP06340 250 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 GUCY1B3Q02153 619 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 OCA2Q04671 838 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 RESTQ13127 1097 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 TP53BP2Q13625 1128 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 B3GNTL1Q67FW5 361 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 MAPKAPK5Q8IW41 473 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 DCBLD1Q8N8Z6 715 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 BEND2Q8NDZ0 799 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 RAB24Q969Q5 203 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 TEKT5Q96M29 485 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 ZSWIM1Q9BR11 485 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 PCDH12Q9NPG4 1184 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 C11orf21Q9P2W6 132 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 SAP30BPQ9UHR5 308 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 IPPQ9Y573 584 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 COL4A3BPQ9Y5P4 624 aa7.09□□□□□ -1.27
TOPBP1-206ENST00000508524 EDNRBP24530 442 aa7.08□□□□□ -1.28
TOPBP1-206ENST00000508524 INHBEP58166 350 aa7.08□□□□□ -1.28
TOPBP1-206ENST00000508524 DACT2Q5SW24 774 aa7.08□□□□□ -1.28
TOPBP1-206ENST00000508524 TMEM132CQ8N3T6 1108 aa7.08□□□□□ -1.28
TOPBP1-206ENST00000508524 REXO4Q9GZR2 422 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-206ENST00000508524 SYBUQ9NX95 663 aa7.08□□□□□ -1.28
TOPBP1-206ENST00000508524 LIMCH1Q9UPQ0 1083 aa7.08□□□□□ -1.28
TOPBP1-206ENST00000508524 TNKSO95271 1327 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 WASHC2CQ9Y4E1 1318 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 A0A1B0GTW7 788 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 TCRBV7S2A1N4TA0A589 114 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 HTRA2O43464 458 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 FGFR4P22455 802 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 SLC16A1P53985 500 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 CTXN1P60606 82 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 CDC42EP1Q00587 391 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 SCAPQ12770 1279 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 SMN1Q16637 294 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 HECTD2Q5U5R9 776 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 MIGA2Q7L4E1 593 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 GPR150Q8NGU9 434 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 ASB10Q8WXI3 467 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 HDAC10Q969S8 669 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 RNPEPQ9H4A4 650 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 PACSIN3Q9UKS6 424 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms