RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 CBX2Q14781 532 aaPredicted RBP8.82□□□□□ -1
SCN1A-207ENST00000507401 ECM1Q16610 540 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 MAPK6Q16659 721 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 TPRNQ4KMQ1 711 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 CCDC183Q5T5S1 534 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 ARL6IP4Q66PJ3 421 aaKnown RBP8.82□□□□□ -1
SCN1A-207ENST00000507401 MAEAQ7L5Y9 396 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 PPFIBP1Q86W92 1011 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 COLGALT2Q8IYK4 626 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 GPR65Q8IYL9 337 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
SCN1A-207ENST00000507401 KIFAP3Q92845 792 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 CPB2Q96IY4 423 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 IFT74Q96LB3 600 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 GAD1Q99259 594 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 LRFN3Q9BTN0 628 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 PHF7Q9BWX1 381 aaPredicted RBP8.82□□□□□ -1
SCN1A-207ENST00000507401 EIF2AQ9BY44 585 aaKnown RBP8.82□□□□□ -1
SCN1A-207ENST00000507401 TRIM6Q9C030 488 aaPredicted RBP8.82□□□□□ -1
SCN1A-207ENST00000507401 BHMT2Q9H2M3 363 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 C17orf75Q9HAS0 396 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 GPRC5CQ9NQ84 441 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 TMEM51Q9NW97 253 aa8.82□□□□□ -1
SCN1A-207ENST00000507401 BARX2Q9UMQ3 279 aaPredicted RBP8.82□□□□□ -1
SCN1A-207ENST00000507401 MORC2Q9Y6X9 1032 aaPredicted RBP8.82□□□□□ -1
SCN1A-207ENST00000507401 PHLPP2Q6ZVD8 1323 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 N4BP3O15049 544 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 SLC26A4O43511 780 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 PRPF40AO75400 957 aaKnown RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 ATP2C1P98194 919 aaPredicted RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 PRPF4BQ13523 1007 aaKnown RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 IL17AQ16552 155 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 QPCTQ16769 361 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 HERC4Q5GLZ8 1057 aaPredicted RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 LARP1BQ659C4 914 aaKnown RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 CES5AQ6NT32 575 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 SYCE2Q6PIF2 218 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 LYPD8Q6UX82 237 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 TMEM173Q86WV6 379 aaPredicted RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 GSTCDQ8NEC7 633 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 SNX29Q8TEQ0 813 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 SLC22A17Q8WUG5 538 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 NECTIN4Q96NY8 510 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 NTPCRQ9BSD7 190 aaKnown RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 TIPINQ9BVW5 301 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 COLEC11Q9BWP8 271 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 EMILIN2Q9BXX0 1053 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 CCDC113Q9H0I3 377 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 GBP3Q9H0R5 595 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 ADAM7Q9H2U9 754 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 YY1AP1Q9H869 796 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 DDX19AQ9NUU7 478 aaKnown RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 DZANK1Q9NVP4 752 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 MIOSQ9NXC5 875 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 SMC3Q9UQE7 1217 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 USP15Q9Y4E8 981 aaPredicted RBP8.81□□□□□ -1
SCN1A-207ENST00000507401 HCFC2Q9Y5Z7 792 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 C5orf42Q9H799 3197 aa8.81□□□□□ -1
SCN1A-207ENST00000507401 PRR33A8MZF0 331 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 J3QL48 77 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 K7ERI5 159 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 B4GALT5O43286 388 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 B4GALT3O60512 393 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 NPTXRO95502 500 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 BRD1O95696 1058 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 SOD2P04179 222 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 MLH1P40692 756 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 SH3BP2P78314 561 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 KCNH2Q12809 1159 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 CUL4AQ13619 759 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 ATAT1Q5SQI0 421 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 HYIQ5T013 277 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 KIAA0319Q5VV43 1072 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 APBB1IPQ7Z5R6 666 aaPredicted RBP8.8□□□□□ -1
SCN1A-207ENST00000507401 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.8□□□□□ -1
SCN1A-207ENST00000507401 RNF135Q8IUD6 432 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 RNF168Q8IYW5 571 aaPredicted RBP8.8□□□□□ -1
SCN1A-207ENST00000507401 KRT222Q8N1A0 295 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 DEPTORQ8TB45 409 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 GPT2Q8TD30 523 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 BCL7CQ8WUZ0 217 aaPredicted RBP8.8□□□□□ -1
SCN1A-207ENST00000507401 BSNDQ8WZ55 320 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 EDAQ92838 391 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 AK8Q96MA6 479 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 DRC1Q96MC2 740 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 ZFP42Q96MM3 310 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 KLHL5Q96PQ7 755 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 ADPGKQ9BRR6 497 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 MMTAG2Q9BU76 263 aaKnown RBP8.8□□□□□ -1
SCN1A-207ENST00000507401 VN1R3Q9BXE9 311 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 NT5C3AQ9H0P0 336 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 RXFP1Q9HBX9 757 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 C11orf16Q9NQ32 467 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 MRPL17Q9NRX2 175 aaKnown RBP8.8□□□□□ -1
SCN1A-207ENST00000507401 CHST7Q9NS84 486 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 KCND2Q9NZV8 630 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 DPP7Q9UHL4 492 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 HES2Q9Y543 173 aa8.8□□□□□ -1
SCN1A-207ENST00000507401 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.79□□□□□ -1
SCN1A-207ENST00000507401 SYCE3A1L190 88 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms