RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 FGFR1P11362 822 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 ACTN1P12814 892 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 TNNI1P19237 187 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 GATMP50440 423 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 SURF1Q15526 300 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 VWA3BQ502W6 1294 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 PSRC1Q6PGN9 363 aaPredicted RBP15.37■□□□□ 0.05
RNF4-208ENST00000507247 WDR49Q8IV35 697 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 CD302Q8IX05 232 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 ANKRD20A12PQ8NF67 263 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 OR5B17Q8NGF7 314 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 HELQQ8TDG4 1101 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 MMRN2Q9H8L6 949 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 INTS13Q9NVM9 706 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 IFNKQ9P0W0 207 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 PLAGL2Q9UPG8 496 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 PCDHB7Q9Y5E2 793 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 A0A1B0GTH6 734 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 SMIM28A0A1B0GU29 152 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 INPPL1O15357 1258 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 EFCAB14O75071 495 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 OFD1O75665 1012 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 AFPP02771 609 aaKnown RBP15.36■□□□□ 0.05
RNF4-208ENST00000507247 KCNE1P15382 129 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 MAGEA10P43363 369 aaPredicted RBP15.36■□□□□ 0.05
RNF4-208ENST00000507247 GCLMP48507 274 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 FMO5P49326 533 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 FXR1P51114 621 aaKnown RBP eCLIP15.36■□□□□ 0.05
RNF4-208ENST00000507247 SCNN1GP51170 649 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 PLCB2Q00722 1185 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 CBWD6Q4V339 395 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 CBWD3Q5JTY5 395 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 CBWD5Q5RIA9 395 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 SCARA3Q6AZY7 606 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 SARM1Q6SZW1 724 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 TMCO2Q7Z6W1 182 aaPredicted RBP15.36■□□□□ 0.05
RNF4-208ENST00000507247 NPAS4Q8IUM7 802 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 MTMR12Q9C0I1 747 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 TMEM117Q9H0C3 514 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 NDST4Q9H3R1 872 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 INPP5FQ9Y2H2 1132 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 C2CD2Q9Y426 696 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 CEP290O15078 2479 aa15.36■□□□□ 0.05
RNF4-208ENST00000507247 ZBBXA8MT70 800 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 LGALS16A8MUM7 142 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 TEX33O43247 280 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 UPP2O95045 317 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 AMHP03971 560 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 C4BPAP04003 597 aaKnown RBP15.35■□□□□ 0.05
RNF4-208ENST00000507247 GUCY2FP51841 1108 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 UBASH3AP57075 661 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 TFAMQ00059 246 aaKnown RBP15.35■□□□□ 0.05
RNF4-208ENST00000507247 TMEM132DQ14C87 1099 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 ZBTB6Q15916 424 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 TDRD10Q5VZ19 366 aaKnown RBP15.35■□□□□ 0.05
RNF4-208ENST00000507247 C15orf39Q6ZRI6 1047 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 USP37Q86T82 979 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 HERVK_113Q902F9 699 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 TOP1MTQ969P6 601 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 C18orf25Q96B23 403 aaPredicted RBP15.35■□□□□ 0.05
RNF4-208ENST00000507247 PPP1R10Q96QC0 940 aaKnown RBP15.35■□□□□ 0.05
RNF4-208ENST00000507247 RPS6KC1Q96S38 1066 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 XPO4Q9C0E2 1151 aaKnown RBP15.35■□□□□ 0.05
RNF4-208ENST00000507247 TMEM8AQ9HCN3 771 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 UBN1Q9NPG3 1134 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 RTN4Q9NQC3 1192 aaKnown RBP15.35■□□□□ 0.05
RNF4-208ENST00000507247 CXXC1Q9P0U4 656 aaPredicted RBP15.35■□□□□ 0.05
RNF4-208ENST00000507247 TUBGCP4Q9UGJ1 667 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 DERAQ9Y315 318 aa15.35■□□□□ 0.05
RNF4-208ENST00000507247 PES1O00541 588 aaKnown RBP15.34■□□□□ 0.05
RNF4-208ENST00000507247 TMEM191BP0C7N4 346 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 GTF2H1P32780 548 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 KCNJ6P48051 423 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 MXI1P50539 228 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 MYL7Q01449 175 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 SOX4Q06945 474 aaPredicted RBP15.34■□□□□ 0.05
RNF4-208ENST00000507247 NR1I3Q14994 352 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 NAB2Q15742 525 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 PTPN21Q16825 1174 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 ZACNQ401N2 412 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 GLB1LQ6UWU2 654 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 SV2AQ7L0J3 742 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 NT5DC4Q86YG4 428 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 ANKRD36BP1Q96IX9 119 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 CASD1Q96PB1 797 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 SCN1AP35498 2009 aa15.34■□□□□ 0.05
RNF4-208ENST00000507247 KIAA1671Q9BY89 1806 aa15.33■□□□□ 0.05
RNF4-208ENST00000507247 STX10O60499 249 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 LRRN2O75325 713 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 VNN1O95497 513 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 POMCP01189 267 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 TPM2P07951 284 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 GRIK3Q13003 919 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 DUOXA2Q1HG44 320 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 NOMO2Q5JPE7 1267 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 C9orf50Q5SZB4 431 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 KRT39Q6A163 491 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 TRAPPC11Q7Z392 1133 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms