RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ATXN3P54252 364 aaPredicted RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 MLLT6P55198 1093 aaPredicted RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 PRKCEQ02156 737 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 LMAN2Q12907 356 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 CCINQ13939 588 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 RAB33AQ14088 237 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 TRIM61Q5EBN2 209 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 UBXN11Q5T124 520 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 ZNF746Q6NUN9 644 aaPredicted RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 CCNI2Q6ZMN8 369 aaPredicted RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 PDZD4Q76G19 769 aaPredicted RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 PIP4P1Q86T03 277 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 ZNF410Q86VK4 478 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 RALGPS2Q86X27 583 aaPredicted RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 HDDC3Q8N4P3 179 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 CCDC82Q8N4S0 544 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 CNNM3Q8NE01 707 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 ZSCAN18Q8TBC5 510 aaPredicted RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 PIP4K2CQ8TBX8 421 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 RILPL2Q969X0 211 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 GTPBP2Q9BX10 602 aaKnown RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 NUSAP1Q9BXS6 441 aaKnown RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 AGPAT5Q9NUQ2 364 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 SNTG2Q9NY99 539 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 IPPQ9Y573 584 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 PCDHB9Q9Y5E1 797 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 MYH9P35579 1960 aaKnown RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 SF3B1O75533 1304 aaKnown RBP eCLIP8.07□□□□□ -1.12
VCAN-207ENST00000507162 PTPRQQ9UMZ3 2332 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 ARNTLO00327 626 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 PRRG1O14668 218 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 CAPN9O14815 690 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 CHADO15335 359 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 MYL4P12829 197 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 HOXA11P31270 313 aaPredicted RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 CCR2P41597 374 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 DGKEP52429 567 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 CYP4F3Q08477 520 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 TRDNQ13061 729 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 SEMA3BQ13214 749 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 HSP90AA2PQ14568 343 aaPredicted RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 KARSQ15046 597 aaKnown RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 PRSS36Q5K4E3 855 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 HEATR3Q7Z4Q2 680 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 SMAP1Q8IYB5 467 aaPredicted RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 HS6ST3Q8IZP7 471 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 CAMKK1Q8N5S9 505 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 CTCFLQ8NI51 663 aaPredicted RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 ZFYVE19Q96K21 471 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 SPZ1Q9BXG8 430 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 EIF2AQ9BY44 585 aaKnown RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 TBC1D22BQ9NU19 505 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 GTSE1Q9NYZ3 720 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 KLK14Q9P0G3 267 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 ZBTB47Q9UFB7 747 aaPredicted RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 PARP2Q9UGN5 583 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 MBD1Q9UIS9 605 aaPredicted RBP8.07□□□□□ -1.12
VCAN-207ENST00000507162 MYO9AB2RTY4 2548 aa8.07□□□□□ -1.12
VCAN-207ENST00000507162 KNTC1P50748 2209 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 TMEM150BA6NC51 233 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 CASTOR2A6NHX0 329 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 FAM86B1E9PN63 330 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 DPYSL4O14531 572 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 PLEKHA8P1O95397 391 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 FOSP01100 380 aaPredicted RBP8.06□□□□□ -1.12
VCAN-207ENST00000507162 FAM86B2P0C5J1 330 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 ENGP17813 658 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 AKAP5P24588 427 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 ARPP19P56211 112 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 GRSF1Q12849 480 aaKnown RBP eCLIP8.06□□□□□ -1.12
VCAN-207ENST00000507162 TRIP6Q15654 476 aaKnown RBP8.06□□□□□ -1.12
VCAN-207ENST00000507162 UGCGQ16739 394 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 USP39Q53GS9 565 aaKnown RBP8.06□□□□□ -1.12
VCAN-207ENST00000507162 PDXDC1Q6P996 788 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 CWC27Q6UX04 472 aaKnown RBP8.06□□□□□ -1.12
VCAN-207ENST00000507162 RTL10Q7L3V2 364 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 NIPA1Q7RTP0 329 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 HAUS6Q7Z4H7 955 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 SRBD1Q8N5C6 995 aaKnown RBP8.06□□□□□ -1.12
VCAN-207ENST00000507162 RSPRY1Q96DX4 576 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 ZNF512Q96ME7 567 aaPredicted RBP8.06□□□□□ -1.12
VCAN-207ENST00000507162 TMEM209Q96SK2 561 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 ARID3AQ99856 593 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 PAAF1Q9BRP4 392 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 ANO3Q9BYT9 981 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 MINDY3Q9H8M7 445 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 FSCN3Q9NQT6 498 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 DISC1Q9NRI5 854 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 SEPT9Q9UHD8 586 aaPredicted RBP8.06□□□□□ -1.12
VCAN-207ENST00000507162 CIZ1Q9ULV3 898 aaPredicted RBP8.06□□□□□ -1.12
VCAN-207ENST00000507162 CDY1Q9Y6F8 540 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 PI4KAP42356 2102 aa8.06□□□□□ -1.12
VCAN-207ENST00000507162 NCANO14594 1321 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 NUP205Q92621 2012 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 ABCA12Q86UK0 2595 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 THADAQ6YHU6 1953 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 OPHN1O60890 802 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 APBB3O95704 486 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms