RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PTENP60484 403 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 FKBP1BP68106 108 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 TMEM62Q0P6H9 643 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 ZPBP2Q6X784 338 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 ZNF572Q7Z3I7 529 aaPredicted RBP13.11□□□□□ -0.31
LIN54-206ENST00000506560 BRSK2Q8IWQ3 736 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 TCP11Q8WWU5 503 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 AP1M1Q9BXS5 423 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 KIAA1586Q9HCI6 787 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 PTPRHQ9HD43 1115 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 RBM47A0AV96 593 aaKnown RBP13.1□□□□□ -0.31
LIN54-206ENST00000506560 ESYT3A0FGR9 886 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 H3BRB1 525 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 CEP104O60308 925 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 CXCL8P10145 99 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 PDE6CP51160 858 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 EFNA5P52803 228 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 NOP14P78316 857 aaKnown RBP13.1□□□□□ -0.31
LIN54-206ENST00000506560 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 NCOA4Q13772 614 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 BRD3Q15059 726 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ZNF568Q3ZCX4 644 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ATF7IP2Q5U623 682 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 USP37Q86T82 979 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
LIN54-206ENST00000506560 FZD8Q9H461 694 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 TUT1Q9H6E5 874 aaKnown RBP13.1□□□□□ -0.31
LIN54-206ENST00000506560 CTTNBP2NLQ9P2B4 639 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 AKT3Q9Y243 479 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 NR2E1Q9Y466 385 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ANK1P16157 1881 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ITGA4P13612 1032 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 CYP2C19P33261 490 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ZNF157P51786 506 aaPredicted RBP13.1□□□□□ -0.31
LIN54-206ENST00000506560 MYL6P60660 151 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 CDR2Q01850 454 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 GCNT1Q02742 428 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ZNF211Q13398 564 aaPredicted RBP13.1□□□□□ -0.31
LIN54-206ENST00000506560 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 TMEM270Q6UE05 265 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ABRAQ8N0Z2 381 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 MMGT1Q8N4V1 131 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ALG3Q92685 438 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 ZIC5Q96T25 663 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 CDT1Q9H211 546 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 KCNG1Q9UIX4 513 aa13.1□□□□□ -0.31
LIN54-206ENST00000506560 CPSF3Q9UKF6 684 aaKnown RBP13.1□□□□□ -0.31
LIN54-206ENST00000506560 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
LIN54-206ENST00000506560 ACKR2O00590 384 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 OGTO15294 1046 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 PHACTR2O75167 634 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 MMP3P08254 477 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 HOXC6P09630 235 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 PROZP22891 400 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 PAFAH1B1P43034 410 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 SLC26A2P50443 739 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 TFAMQ00059 246 aaKnown RBP13.09□□□□□ -0.31
LIN54-206ENST00000506560 MCL1Q07820 350 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 CFAP221Q4G0U5 840 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 ADAT2Q7Z6V5 191 aaKnown RBP13.09□□□□□ -0.31
LIN54-206ENST00000506560 RASAL3Q86YV0 1011 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 KLHL7Q8IXQ5 586 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 LINC01465Q8N7H1 131 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 KRT35Q92764 455 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 KRT12Q99456 494 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 CXCL16Q9H2A7 254 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 SETD4Q9NVD3 440 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 L1RE1Q9UN81 338 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 GINS2Q9Y248 185 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 UNCXA6NJT0 531 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 DDX3YO15523 660 aaKnown RBP13.09□□□□□ -0.31
LIN54-206ENST00000506560 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
LIN54-206ENST00000506560 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
LIN54-206ENST00000506560 GLI1P08151 1106 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 CUL2Q13617 745 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 HIC1Q14526 733 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 LLGL1Q15334 1064 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 AMHR2Q16671 573 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 DUSP28Q4G0W2 176 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 ZNF394Q53GI3 561 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 WDR44Q5JSH3 913 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 DAB2IPQ5VWQ8 1189 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 WDR93Q6P2C0 686 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 SCARA5Q6ZMJ2 495 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 OR6J1Q8NGC5 347 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 HES6Q96HZ4 224 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 RTN2O75298 545 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 CLTAP09496 248 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 CD58P19256 250 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 MESDQ14696 234 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 MTHFD1LQ6UB35 978 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 MPZL3Q6UWV2 235 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 TSHZ1Q6ZSZ6 1077 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms