RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 SLITRK6Q9H5Y7 841 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 BRD9Q9H8M2 597 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 HEBP1Q9NRV9 189 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 RYDENQ9NUL5 291 aaKnown RBP9.09□□□□□ -0.95
SNF8-204ENST00000506104 DLGAP2Q9P1A6 1054 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 GMEB2Q9UKD1 530 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 CDV3Q9UKY7 258 aaKnown RBP9.09□□□□□ -0.95
SNF8-204ENST00000506104 PTGESO14684 152 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 TRAPPC3O43617 180 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 MED24O75448 989 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 EFEMP2O95967 443 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 RHOP08100 348 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 MYL4P12829 197 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 CEBPBP17676 345 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 PTPN2P17706 415 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 MATR3P43243 847 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNF8-204ENST00000506104 YARSP54577 528 aaKnown RBP9.08□□□□□ -0.96
SNF8-204ENST00000506104 POU5F1BQ06416 359 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 PPP2R5AQ15172 486 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 SAFBQ15424 915 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNF8-204ENST00000506104 ZNF174Q15697 407 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 ATF7IP2Q5U623 682 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 ZNF852Q6ZMS4 543 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 APBB1IPQ7Z5R6 666 aaPredicted RBP9.08□□□□□ -0.96
SNF8-204ENST00000506104 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 NPAS3Q8IXF0 933 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 ELMOD1Q8N336 334 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 BSNDQ8WZ55 320 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 NACC1Q96RE7 527 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 HSD17B14Q9BPX1 270 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 TCHPQ9BT92 498 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 TM6SF1Q9BZW5 370 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 CYP4F11Q9HBI6 524 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 SMG5Q9UPR3 1016 aaKnown RBP9.08□□□□□ -0.96
SNF8-204ENST00000506104 MRPS17Q9Y2R5 130 aaKnown RBP9.08□□□□□ -0.96
SNF8-204ENST00000506104 NUB1Q9Y5A7 615 aa9.08□□□□□ -0.96
SNF8-204ENST00000506104 GVINP1Q7Z2Y8 2422 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 ZNF638Q14966 1978 aaKnown RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 DCDC2BA2VCK2 349 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 WNT7AO00755 349 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 SPTLC1O15269 473 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 JAK2O60674 1132 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 LYPLA2O95372 231 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 CTDNEP1O95476 244 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 IGFBP6P24592 240 aaPredicted RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 TARSP26639 723 aaKnown RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 MCM4P33991 863 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 CCT6AP40227 531 aaKnown RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 RAB33AQ14088 237 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 ANKRD1Q15327 319 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 ZRSR1Q15695 479 aaKnown RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 DCAF4L1Q3SXM0 396 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 TANGO2Q6ICL3 276 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 RSPO2Q6UXX9 243 aaPredicted RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 ANKS3Q6ZW76 656 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 PDZD4Q76G19 769 aaPredicted RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 CATSPER3Q86XQ3 398 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 YAF2Q8IY57 180 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 GPR65Q8IYL9 337 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 MAML2Q8IZL2 1156 aaPredicted RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 SUMF1Q8NBK3 374 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 CHAMP1Q96JM3 812 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 CCDC94Q9BW85 323 aaPredicted RBP9.07□□□□□ -0.96
SNF8-204ENST00000506104 NFKBIZQ9BYH8 718 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 TMEM60Q9H2L4 133 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 FZD8Q9H461 694 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 ZFP14Q9HCL3 533 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 TUFT1Q9NNX1 390 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 ZSCAN32Q9NX65 697 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 MTRRQ9UBK8 725 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 FBXO4Q9UKT5 387 aa9.07□□□□□ -0.96
SNF8-204ENST00000506104 KIF26AQ9ULI4 1882 aaPredicted RBP9.06□□□□□ -0.96
SNF8-204ENST00000506104 ATG2BQ96BY7 2078 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 K7ERI5 159 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 ACKR2O00590 384 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 LARGE1O95461 756 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 C1RP00736 705 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 CPB1P15086 417 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 GJA1P17302 382 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 FGFR3P22607 806 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 MARCKSP29966 332 aaPredicted RBP9.06□□□□□ -0.96
SNF8-204ENST00000506104 GDI1P31150 447 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 HOXA9P31269 272 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 NAMPTP43490 491 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 SPEM2Q0P670 501 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 MTAPQ13126 283 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 PPP2R5DQ14738 602 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 SLC5A9Q2M3M2 681 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 ZNF568Q3ZCX4 644 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 CTXN3Q4LDR2 81 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 CYP4A22Q5TCH4 519 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 HEATR6Q6AI08 1181 aaKnown RBP9.06□□□□□ -0.96
SNF8-204ENST00000506104 IQCEQ6IPM2 695 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 CEP120Q8N960 986 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 TTC8Q8TAM2 541 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 FAM200AQ8TCP9 573 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 CSGALNACT1Q8TDX6 532 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 FAM3CQ92520 227 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms