RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 RUFY1Q96T51 708 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 FZD8Q9H461 694 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 MRPL47Q9HD33 250 aaKnown RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 MTUS1Q9ULD2 1270 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 LSM8O95777 96 aaKnown RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 TNNC2P02585 160 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 PGK2P07205 417 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 TDRD10Q5VZ19 366 aaKnown RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 ZSWIM2Q8NEG5 633 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 ZNF564Q8TBZ8 553 aaPredicted RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 KRT12Q99456 494 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 ZSWIM1Q9BR11 485 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 TCHPQ9BT92 498 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 HPCAL4Q9UM19 191 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 CNTNAP2Q9UHC6 1331 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 A6NNZ2 444 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 DDX3YO15523 660 aaKnown RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 PROZP22891 400 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 NSFP46459 744 aaKnown RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 PCBP1Q15365 356 aaKnown RBP eCLIP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 SGSM1Q2NKQ1 1148 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 TUBB8Q3ZCM7 444 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 SPDYCQ5MJ68 293 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 FBXO16Q8IX29 292 aaPredicted RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 RNF149Q8NC42 400 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 DDX1Q92499 740 aaKnown RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 EXOC4Q96A65 974 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 LRRC45Q96CN5 670 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 ZNF518BQ9C0D4 1074 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 PDE11AQ9HCR9 933 aa12.14□□□□□ -0.47
NFKB1-205ENST00000505458 TOPORSQ9NS56 1045 aaPredicted RBP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.14□□□□□ -0.47
NFKB1-205ENST00000505458 ERLIN2O94905 339 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ARIH2O95376 493 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 PTENP60484 403 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 NOP14P78316 857 aaKnown RBP12.13□□□□□ -0.47
NFKB1-205ENST00000505458 CENPCQ03188 943 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 NCOA4Q13772 614 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 Q3C1V9 767 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 SLC47A2Q86VL8 602 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 NT5DC4Q86YG4 428 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ARHGEF26Q96DR7 871 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ANKRD36BP1Q96IX9 119 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ALG6Q9Y672 507 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 CCL15-CCL14A0A0B4J2E2 113 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 PDHXO00330 501 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ZEB2O60315 1214 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 SORBS3O60504 671 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 B4GALT4O60513 344 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 HSF2BPO75031 334 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 MCF2P10911 925 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 MAN1A1P33908 653 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 MTMR3Q13615 1198 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 CCL15Q16663 113 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 HSDL1Q3SXM5 330 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 MS4A14Q96JA4 679 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 OSGEPQ9NPF4 335 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 GOLGA6BA6NDN3 693 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 PPFIA4O75335 1185 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 CYP1A1P04798 512 aaPredicted RBP12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ACOT2P49753 483 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 TAP1Q03518 808 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ARHGAP1Q07960 439 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ATF7IP2Q5U623 682 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 ZNF516Q92618 1163 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 KAT5Q92993 513 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 RNPC3Q96LT9 517 aaKnown RBP12.13□□□□□ -0.47
NFKB1-205ENST00000505458 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
NFKB1-205ENST00000505458 NUP85Q9BW27 656 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 NIF3L1Q9GZT8 377 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 SUGCTQ9HAC7 445 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 DMGDHQ9UI17 866 aaKnown RBP12.13□□□□□ -0.47
NFKB1-205ENST00000505458 CPSF3Q9UKF6 684 aaKnown RBP12.13□□□□□ -0.47
NFKB1-205ENST00000505458 PACSIN2Q9UNF0 486 aaPredicted RBP12.13□□□□□ -0.47
NFKB1-205ENST00000505458 TELO2Q9Y4R8 837 aa12.13□□□□□ -0.47
NFKB1-205ENST00000505458 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 ASS1P00966 412 aaKnown RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 MMEP08473 750 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 CHRNA3P32297 505 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 CTNNA1P35221 906 aaKnown RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 TRPC3Q13507 836 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 MOB2Q70IA6 237 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 TAS2R14Q9NYV8 317 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 UTP11Q9Y3A2 253 aaKnown RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 MCM3APO60318 1980 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 SLC15A5A6NIM6 579 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 HOXD8P13378 290 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-205ENST00000505458 ADORA2AP29274 412 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 GJA5P36382 358 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 DMTNQ08495 405 aa12.12□□□□□ -0.47
NFKB1-205ENST00000505458 PTP4A2Q12974 167 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms