RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 GRM5P41594 1212 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 UBE2HP62256 183 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 TCF15Q12870 199 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 KMT5BQ4FZB7 885 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 EPM2AIP1Q7L775 607 aaPredicted RBP18.41■□□□□ 0.54
SYNE4-207ENST00000505054 GSTCDQ8NEC7 633 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 ASIC4Q96FT7 647 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 ACCSQ96QU6 501 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 TCF25Q9BQ70 676 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 CXCL16Q9H2A7 254 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 MIOSQ9NXC5 875 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 PUF60Q9UHX1 559 aaKnown RBP18.41■□□□□ 0.54
SYNE4-207ENST00000505054 GDAQ9Y2T3 454 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 FAM189A1O60320 539 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 RPN1P04843 607 aaKnown RBP18.4■□□□□ 0.54
SYNE4-207ENST00000505054 HOXD13P35453 343 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 SCNN1GP51170 649 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 OSTNP61366 133 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 POSTNQ15063 836 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 KANK3Q6NY19 840 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 URGCPQ8TCY9 931 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 TIGD1Q96MW7 591 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 ZNF558Q96NG5 402 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 S1PR5Q9H228 398 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 SLC39A2Q9NP94 309 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 NGRNQ9NPE2 291 aaKnown RBP18.4■□□□□ 0.54
SYNE4-207ENST00000505054 EXOC1Q9NV70 894 aa18.4■□□□□ 0.54
SYNE4-207ENST00000505054 USP34Q70CQ2 3546 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 A0A0B4J269 797 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 EIF3DO15371 548 aaKnown RBP eCLIP18.39■□□□□ 0.53
SYNE4-207ENST00000505054 MEFVO15553 781 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-207ENST00000505054 POMCP01189 267 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 HOXB8P17481 243 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-207ENST00000505054 ADSSP30520 456 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 PBX3P40426 434 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 STK4Q13043 487 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 PNOCQ13519 176 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 SEZ6Q53EL9 994 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 ZBTB41Q5SVQ8 909 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 SYCE2Q6PIF2 218 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 KCNT2Q6UVM3 1135 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 ZNF280BQ86YH2 543 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 KIAA0895Q8NCT3 520 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 SCFD1Q8WVM8 642 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 CCDC94Q9BW85 323 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-207ENST00000505054 NRDE2Q9H7Z3 1164 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 EXOC7Q9UPT5 735 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 STYXL1Q9Y6J8 313 aa18.39■□□□□ 0.53
SYNE4-207ENST00000505054 CACNA1HO95180 2353 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 PTGESO14684 152 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 DDHD2O94830 711 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.53
SYNE4-207ENST00000505054 VCPP55072 806 aaKnown RBP18.38■□□□□ 0.53
SYNE4-207ENST00000505054 LLGL2Q6P1M3 1020 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 STXBP4Q6ZWJ1 553 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 ZNF507Q8TCN5 953 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 CASP10Q92851 521 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 SNX27Q96L92 541 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 MSTO1Q9BUK6 570 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 GBP3Q9H0R5 595 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 KANSL3Q9P2N6 904 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 DNAJB4Q9UDY4 337 aa18.38■□□□□ 0.53
SYNE4-207ENST00000505054 PLXNA3P51805 1871 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 DENND4AQ7Z401 1863 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 HIDE1A8MVS5 230 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 OGTO15294 1046 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 KINO60870 393 aaKnown RBP18.37■□□□□ 0.53
SYNE4-207ENST00000505054 ZC3H11AO75152 810 aaKnown RBP eCLIP18.37■□□□□ 0.53
SYNE4-207ENST00000505054 RHOBTB3O94955 611 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 KRT17Q04695 432 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 RNASELQ05823 741 aaKnown RBP18.37■□□□□ 0.53
SYNE4-207ENST00000505054 DSC1Q08554 894 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 GRIK3Q13003 919 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 BMT2Q1RMZ1 405 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 SYCP3Q8IZU3 236 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 CCDC34Q96HJ3 373 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 GBP4Q96PP9 640 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 RPS6KC1Q96S38 1066 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 IRF2BPLQ9H1B7 796 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 TMEM206Q9H813 350 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 SPG21Q9NZD8 308 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 NR2E1Q9Y466 385 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 UBE4BO95155 1302 aa18.37■□□□□ 0.53
SYNE4-207ENST00000505054 TNFSF9P41273 254 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 SLC11A1P49279 550 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 BCAR1P56945 870 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 PSMD2Q13200 908 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 SMC1AQ14683 1233 aaKnown RBP18.36■□□□□ 0.53
SYNE4-207ENST00000505054 KCNB1Q14721 858 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 NAB2Q15742 525 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 XKR4Q5GH76 650 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 SLFN12LQ6IEE8 588 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 ALKAL1Q6UXT8 129 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 TMC7Q7Z402 723 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 TMEM173Q86WV6 379 aaPredicted RBP18.36■□□□□ 0.53
SYNE4-207ENST00000505054 NELFCDQ8IXH7 590 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 COLGALT2Q8IYK4 626 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 ERCC4Q92889 916 aaPredicted RBP18.36■□□□□ 0.53
SYNE4-207ENST00000505054 ACAP3Q96P50 834 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 APOL5Q9BWW9 433 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms