RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 ALS2CLQ60I27 953 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 ZNF564Q8TBZ8 553 aaPredicted RBP16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 CASKIN2Q8WXE0 1202 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 ZNF653Q96CK0 615 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 RNPC3Q96LT9 517 aaKnown RBP16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 NUP85Q9BW27 656 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 NFU1Q9UMS0 254 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 SLC45A1Q9Y2W3 748 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 PRKCBP05771 671 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 CYP2C8P10632 490 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 COMTP21964 271 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 CUL1Q13616 776 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 LAMC2Q13753 1193 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 DCAF12L1Q5VU92 463 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 WDR49Q8IV35 697 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 LRRC71Q8N4P6 559 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 WHAMMQ8TF30 809 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 COPS5Q92905 334 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 EXOC4Q96A65 974 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 FAM84AQ96KN4 292 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 PDGFCQ9NRA1 345 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 TRPC6Q9Y210 931 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 FAN1Q9Y2M0 1017 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 GOLGA6L10A0A0M3HER8 536 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ZSCAN5CA6NGD5 496 aaPredicted RBP16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 OGTO15294 1046 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 HARSP12081 509 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ITGA4P13612 1032 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ACO1P21399 889 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 GGCXP38435 758 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 MCL1Q07820 350 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 NCOA4Q13772 614 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ARMCX2Q7L311 632 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ZBTB33Q86T24 672 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 RHPN2Q8IUC4 686 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 OR5B17Q8NGF7 314 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ALG3Q92685 438 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 TRIM11Q96F44 468 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ZSWIM1Q9BR11 485 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 DDX47Q9H0S4 455 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ERAP1Q9NZ08 941 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 CNOT8Q9UFF9 292 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 CNTN6Q9UQ52 1028 aa16.53■□□□□ 0.24
SNCAIP-207ENST00000504884 ESYT3A0FGR9 886 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 TTLL13PA6NNM8 815 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 TMEM110-MUSTN1A8MSY1 372 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 BHMG1C9JSJ3 638 aaPredicted RBP16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 AGPSO00116 658 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 ACKR2O00590 384 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 FAM189A1O60320 539 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 CLTAP09496 248 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 MYBL1P10243 752 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 CETPP11597 493 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 HSPA6P17066 643 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 ZNF792Q3KQV3 632 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 SEZ6Q53EL9 994 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 SPOPLQ6IQ16 392 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 EFCAB12Q6NXP0 572 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 IMPG2Q9BZV3 1241 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 PLEKHA4Q9H4M7 779 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 APOBEC3GQ9HC16 384 aaKnown RBP16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 AVENQ9NQS1 362 aaPredicted RBP16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 PSD3Q9NYI0 1048 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 PCDHB4Q9Y5E5 795 aa16.52■□□□□ 0.24
SNCAIP-207ENST00000504884 CCDC66A2RUB6 948 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 ATMINO43313 823 aaPredicted RBP16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 STRNO43815 780 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 HSF2BPO75031 334 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 CYP1A1P04798 512 aaPredicted RBP16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 PEX5P50542 639 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 NOP14P78316 857 aaKnown RBP16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 ZNF484Q5JVG2 852 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 TRIM72Q6ZMU5 477 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 TSHZ1Q6ZSZ6 1077 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 MCOLN2Q8IZK6 566 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 ABRAQ8N0Z2 381 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 MREGQ8N565 214 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 CD101Q93033 1021 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 FZD8Q9H461 694 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 VTA1Q9NP79 307 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 AMACRQ9UHK6 382 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.23
SNCAIP-207ENST00000504884 PDHXO00330 501 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 RNF40O75150 1001 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 CTNNA2P26232 953 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 CYP2C19P33261 490 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 TNFSF9P41273 254 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 GTF2A2P52657 109 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 GYS2P54840 703 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 PTENP60484 403 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 POU5F1BQ06416 359 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 DUOXA2Q1HG44 320 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 TMEM63BQ5T3F8 832 aa16.51■□□□□ 0.23
SNCAIP-207ENST00000504884 SMYD5Q6GMV2 418 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms