RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 KIF11P52732 1056 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 YARSP54577 528 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 WNT7BP56706 349 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 MGAT3Q09327 533 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 MTF1Q14872 753 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 SEZ6Q53EL9 994 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 ZNF662Q6ZS27 426 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 CDR2LQ86X02 465 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 PPM1KQ8N3J5 372 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 CEP120Q8N960 986 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 SLC43A3Q8NBI5 491 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 SH3TC2Q8TF17 1288 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 SEMA4DQ92854 862 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 FAXDC2Q96IV6 333 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 CDHR5Q9HBB8 845 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 UBE2TQ9NPD8 197 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 CHST12Q9NRB3 414 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 TRMT1Q9NXH9 659 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 SQORQ9Y6N5 450 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
POLR2J3-210ENST00000504677 USP27XA6NNY8 438 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 RBAK-RBAKDNI3L0D1 243 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 GPR182O15218 404 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 RPS6KA5O75582 802 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 OFD1O75665 1012 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 FGFR4P22455 802 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 EIF4A3P38919 411 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 THPOP40225 353 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 OSTNP61366 133 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 TRPC3Q13507 836 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 NCOA4Q13772 614 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 PTPN14Q15678 1187 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 FAM26DQ5JW98 314 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 LMBRD2Q68DH5 695 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 GJB7Q6PEY0 223 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 FAM43BQ6ZT52 329 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 IRF2BP2Q7Z5L9 587 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 FAM228AQ86W67 206 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 ARHGEF19Q8IW93 802 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 REXO1L1PQ8IX06 675 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 HACE1Q8IYU2 909 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 USP38Q8NB14 1042 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 OR5B17Q8NGF7 314 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 HELQQ8TDG4 1101 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 TMEM40Q8WWA1 233 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 SHC3Q92529 594 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 TAF4BQ92750 862 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 DESI2Q9BSY9 194 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 MTMR12Q9C0I1 747 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 UNC93B1Q9H1C4 597 aa12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 AJAP1Q9UKB5 411 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-210ENST00000504677 LACTBL1A8MY62 500 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 ARVCFO00192 962 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 EVI5O60447 810 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 VNN1O95497 513 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 NOP14P78316 857 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 TFAMQ00059 246 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 TMEM132DQ14C87 1099 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 ARHGAP44Q17R89 818 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 SGSM1Q2NKQ1 1148 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 ASTE1Q2TB18 679 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 DNTTIP2Q5QJE6 756 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 C10orf76Q5T2E6 689 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 KIAA1328Q86T90 577 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 EFCAB13Q8IY85 973 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 ACRBPQ8NEB7 543 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 GPR88Q9GZN0 384 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 ITGA11Q9UKX5 1188 aa12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 NOC2LQ9Y3T9 749 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-210ENST00000504677 PDCD11Q14690 1871 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 LRRN2O75325 713 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 ASS1P00966 412 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 CHRNA1P02708 482 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 PLEKP08567 350 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 CTSHP09668 335 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 CCL5P13501 91 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 ATICP31939 592 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 RAB27AP51159 221 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 VAV2P52735 878 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 YWHAEP62258 255 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 ARID5AQ03989 594 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 TRIM71Q2Q1W2 868 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 SLC10A6Q3KNW5 377 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 FBXO47Q5MNV8 452 aa12.85□□□□□ -0.35
POLR2J3-210ENST00000504677 TWF2Q6IBS0 349 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms