RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 HCSTQ9UBK5 93 aa15.14■□□□□ 0.01
DDR1-253ENST00000504651 PLAGL2Q9UPG8 496 aa15.14■□□□□ 0.01
DDR1-253ENST00000504651 NFE2L3Q9Y4A8 694 aa15.14■□□□□ 0.01
DDR1-253ENST00000504651 PCDHA11Q9Y5I1 949 aa15.14■□□□□ 0.01
DDR1-253ENST00000504651 LCHNA4D1U4 455 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 GNA14O95837 355 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 TMEM191BP0C7N4 346 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
DDR1-253ENST00000504651 ZNF165P49910 485 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 VAMP7P51809 220 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 ZNF445P59923 1031 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 BFSP1Q12934 665 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 DCAF17Q5H9S7 520 aaPredicted RBP15.13■□□□□ 0.01
DDR1-253ENST00000504651 USP37Q86T82 979 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 WDR49Q8IV35 697 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 FAM114A1Q8IWE2 563 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 EFCAB13Q8IY85 973 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 CNOT6LQ96LI5 555 aaKnown RBP15.13■□□□□ 0.01
DDR1-253ENST00000504651 TSPAN18Q96SJ8 248 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 THAP9Q9H5L6 903 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 MAGEC2Q9UBF1 373 aaPredicted RBP15.13■□□□□ 0.01
DDR1-253ENST00000504651 ARMCX3Q9UH62 379 aaPredicted RBP15.13■□□□□ 0.01
DDR1-253ENST00000504651 MSRAQ9UJ68 235 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 UBQLN1Q9UMX0 589 aaKnown RBP15.13■□□□□ 0.01
DDR1-253ENST00000504651 DERAQ9Y315 318 aa15.13■□□□□ 0.01
DDR1-253ENST00000504651 MRPL42Q9Y6G3 142 aaKnown RBP15.13■□□□□ 0.01
DDR1-253ENST00000504651 LRRIQ3A6PVS8 624 aaPredicted RBP15.12■□□□□ 0.01
DDR1-253ENST00000504651 SMTNL1A8MU46 457 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
DDR1-253ENST00000504651 CA3P07451 260 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 MYOGP15173 224 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 TNNI1P19237 187 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 PBX2P40425 430 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 TFAMQ00059 246 aaKnown RBP15.12■□□□□ 0.01
DDR1-253ENST00000504651 TUSC3Q13454 348 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 TCERG1LQ5VWI1 586 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 LMBRD2Q68DH5 695 aaPredicted RBP15.12■□□□□ 0.01
DDR1-253ENST00000504651 NT5DC4Q86YG4 428 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 CREBRFQ8IUR6 639 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 BEST2Q8NFU1 509 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 PLEKHO2Q8TD55 490 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 C18orf25Q96B23 403 aaPredicted RBP15.12■□□□□ 0.01
DDR1-253ENST00000504651 ANKRD36BP1Q96IX9 119 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 PBX4Q9BYU1 374 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 NRDE2Q9H7Z3 1164 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 METTL14Q9HCE5 456 aaKnown RBP15.12■□□□□ 0.01
DDR1-253ENST00000504651 TUBGCP4Q9UGJ1 667 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 YBX2Q9Y2T7 364 aaKnown RBP15.12■□□□□ 0.01
DDR1-253ENST00000504651 C2CD2Q9Y426 696 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 CEP290O15078 2479 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 PTPRJQ12913 1337 aa15.12■□□□□ 0.01
DDR1-253ENST00000504651 CASTOR2A6NHX0 329 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 BECN2A8MW95 431 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 IKBKBO14920 756 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 DDHD2O94830 711 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 CAVIN2O95810 425 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 TNNC2P02585 160 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 TRIM49P0CI25 452 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 TRIM49CP0CI26 452 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 LAG3P18627 525 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 DLG4P78352 724 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 SMAD3P84022 425 aaKnown RBP15.11■□□□□ 0.01
DDR1-253ENST00000504651 DSC1Q08554 894 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 NAB2Q15742 525 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 HSP90AA4PQ58FG1 418 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 FRMD5Q7Z6J6 570 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 ZNF280BQ86YH2 543 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 PARD3BQ8TEW8 1205 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
DDR1-253ENST00000504651 TMEM175Q9BSA9 504 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 MTMR12Q9C0I1 747 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 NKX2-4Q9H2Z4 354 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 CWH43Q9H720 699 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 SAMSN1Q9NSI8 373 aaKnown RBP15.11■□□□□ 0.01
DDR1-253ENST00000504651 DNAJB4Q9UDY4 337 aa15.11■□□□□ 0.01
DDR1-253ENST00000504651 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.11■□□□□ 0.01
DDR1-253ENST00000504651 COL4A4P53420 1690 aaPredicted RBP15.1■□□□□ 0.01
DDR1-253ENST00000504651 LINC01553A4QN01 128 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 B4GALT3O60512 393 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 DNAJB2P25686 324 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 MTIF2P46199 727 aaKnown RBP15.1■□□□□ 0.01
DDR1-253ENST00000504651 OR1G1P47890 313 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 GUCY2FP51841 1108 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 MARSP56192 900 aaKnown RBP15.1■□□□□ 0.01
DDR1-253ENST00000504651 SOX4Q06945 474 aaPredicted RBP15.1■□□□□ 0.01
DDR1-253ENST00000504651 ENPEPQ07075 957 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 ZBTB6Q15916 424 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 LRIT3Q3SXY7 679 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 DHX40Q8IX18 779 aaKnown RBP15.1■□□□□ 0.01
DDR1-253ENST00000504651 COLGALT2Q8IYK4 626 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 OR5B17Q8NGF7 314 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 FAM200AQ8TCP9 573 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 BORCS6Q96GS4 357 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 FAM84AQ96KN4 292 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 UROC1Q96N76 676 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 ZNF558Q96NG5 402 aa15.1■□□□□ 0.01
DDR1-253ENST00000504651 POP1Q99575 1024 aaKnown RBP15.1■□□□□ 0.01
DDR1-253ENST00000504651 ANP32EQ9BTT0 268 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms