RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 KINO60870 393 aaKnown RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 ZIC2O95409 532 aaPredicted RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 PAPLNO95428 1278 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 P4HBP07237 508 aaKnown RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 AXLP30530 894 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 HOXA11P31270 313 aaPredicted RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 YWHABP31946 246 aaKnown RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 HSPA4P34932 840 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 CYP4A11Q02928 519 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 CREMQ03060 361 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 HTR4Q13639 388 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 TFDP1Q14186 410 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 PUM1Q14671 1186 aaKnown RBP eCLIP10.07□□□□□ -0.8
DHFR-202ENST00000504396 UBXN2BQ14CS0 331 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 USP41Q3LFD5 358 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 LIN9Q5TKA1 542 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 KIAA0319Q5VV43 1072 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 FUT10Q6P4F1 479 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 OTUD6AQ7L8S5 288 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 KRT25Q7Z3Z0 450 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 FERMT3Q86UX7 667 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 DCLK2Q8N568 766 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 PJA1Q8NG27 643 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 ADAM32Q8TC27 787 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 HASPINQ8TF76 798 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 ITPKCQ96DU7 683 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 CCDC51Q96ER9 411 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 SHDQ96IW2 340 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 FAM20AQ96MK3 541 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 NXF3Q9H4D5 531 aaKnown RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 DHX33Q9H6R0 707 aaKnown RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 RXFP1Q9HBX9 757 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.07□□□□□ -0.8
DHFR-202ENST00000504396 ZDHHC7Q9NXF8 308 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 PARP2Q9UGN5 583 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 SNX14Q9Y5W7 946 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 DCHS1Q96JQ0 3298 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 MYH15Q9Y2K3 1946 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 DMDP11532 3685 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 LAMTOR5O43504 91 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 LRRN2O75325 713 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 TADA2AO75478 443 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 DEXIO95424 95 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 AKAP5P24588 427 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 PDIA3P30101 505 aaKnown RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 STK3Q13188 491 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 PPP2R5CQ13362 524 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 SNW1Q13573 536 aaKnown RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 CTTNQ14247 550 aaKnown RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 PHLDB3Q6NSJ2 640 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 CPLX2Q6PUV4 134 aaKnown RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 PRSS55Q6UWB4 352 aaPredicted RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 CENPQQ7L2Z9 268 aaPredicted RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 GRASPQ7Z6J2 395 aaPredicted RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 CEP57Q86XR8 500 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 NAP1L4Q99733 375 aaKnown RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 BCO2Q9BYV7 579 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 GPR62Q9BZJ7 368 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 CSRNP2Q9H175 543 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 KLK14Q9P0G3 267 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 WRAP73Q9P2S5 460 aaPredicted RBP10.06□□□□□ -0.8
DHFR-202ENST00000504396 ADAM28Q9UKQ2 775 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 VAV3Q9UKW4 847 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 GPSM3Q9Y4H4 160 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 ZMYM2Q9UBW7 1377 aa10.06□□□□□ -0.8
DHFR-202ENST00000504396 GVINP1Q7Z2Y8 2422 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 DOCK8Q8NF50 2099 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 M0R2N6 131 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 TBX3O15119 743 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 EPB41L2O43491 1005 aaKnown RBP10.05□□□□□ -0.8
DHFR-202ENST00000504396 CCNT1O60563 726 aaKnown RBP10.05□□□□□ -0.8
DHFR-202ENST00000504396 NPTXRO95502 500 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 GCFC2P16383 781 aaKnown RBP10.05□□□□□ -0.8
DHFR-202ENST00000504396 GPC5P78333 572 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 NTHL1P78549 312 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 POU5F1BQ06416 359 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 DSC1Q08554 894 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 GRIK3Q13003 919 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 MXD4Q14582 209 aaPredicted RBP10.05□□□□□ -0.8
DHFR-202ENST00000504396 RSPO4Q2I0M5 234 aaPredicted RBP10.05□□□□□ -0.8
DHFR-202ENST00000504396 PPM1LQ5SGD2 360 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 PARM1Q6UWI2 310 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 NEK8Q86SG6 692 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 CDR2LQ86X02 465 aaPredicted RBP10.05□□□□□ -0.8
DHFR-202ENST00000504396 TPH2Q8IWU9 490 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 C4orf19Q8IY42 314 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 RNF168Q8IYW5 571 aaPredicted RBP10.05□□□□□ -0.8
DHFR-202ENST00000504396 SECISBP2LQ93073 1101 aaKnown RBP10.05□□□□□ -0.8
DHFR-202ENST00000504396 DYDC2Q96IM9 177 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 AIFM3Q96NN9 605 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 SLC2A4RGQ9NR83 387 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 MIOSQ9NXC5 875 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 RGL1Q9NZL6 768 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 CACNG4Q9UBN1 327 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 KCNJ14Q9UNX9 436 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 GIT1Q9Y2X7 761 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 SF3B1O75533 1304 aaKnown RBP eCLIP10.05□□□□□ -0.81e-7■■■■■ 172.3
DHFR-202ENST00000504396 COL4A3Q01955 1670 aa10.05□□□□□ -0.8
DHFR-202ENST00000504396 FANCMQ8IYD8 2048 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms