RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 IGFBP6P24592 240 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 DNAJB2P25686 324 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 RPL13P26373 211 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 DLG4P78352 724 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 FKBP3Q00688 224 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 SOX4Q06945 474 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 NAB2Q15742 525 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 ZC3H3Q8IXZ2 948 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 EFCAB13Q8IY85 973 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 LRRC43Q8N309 656 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 CSGALNACT2Q8N6G5 542 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 FAM193BQ96PV7 902 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 PPP1R10Q96QC0 940 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 PAAF1Q9BRP4 392 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 C17orf80Q9BSJ5 609 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 PLEKHA5Q9HAU0 1116 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 KIAA1586Q9HCI6 787 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 TUBGCP4Q9UGJ1 667 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 DACH1Q9UI36 760 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 MTUS1Q9ULD2 1270 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 FRMD4BQ9Y2L6 1034 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 KIAA1671Q9BY89 1806 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 RALGAPA2Q2PPJ7 1873 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 PTPRJQ12913 1337 aa14.4□□□□□ -0.1
PDLIM7-212ENST00000504380 F8W810 466 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 ZC3H11AO75152 810 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 LINC00271P0C7V0 271 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 CCDC192P0DO97 292 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 DLATP10515 647 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 PSMC2P35998 433 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 SLC11A1P49279 550 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 SMAD3P84022 425 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 TAP1Q03518 808 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 GRIK3Q13003 919 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 MYBPC2Q14324 1141 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 PSMD6Q15008 389 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 RAB30Q15771 203 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 HSP90AA4PQ58FG1 418 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 COLGALT2Q8IYK4 626 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 TIFAQ96CG3 184 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 MFSD14AQ96MC6 490 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 KANSL3Q9P2N6 904 aa14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 PDCD11Q14690 1871 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-212ENST00000504380 IL18RAPO95256 599 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 ERCC5P28715 1186 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 OR1G1P47890 313 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 BCAR1P56945 870 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 TFAMQ00059 246 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 TMEM132DQ14C87 1099 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 ZBTB6Q15916 424 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 TPD52L1Q16890 204 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 PPP2R2DQ66LE6 453 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 CREBRFQ8IUR6 639 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 COLGALT1Q8NBJ5 622 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 OR5B17Q8NGF7 314 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 ZNF516Q92618 1163 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 MRPL9Q9BYD2 267 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 ASB7Q9H672 318 aa14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 PRG3Q9Y2Y8 225 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 LAMA2P24043 3122 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-212ENST00000504380 VCANP13611 3396 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 LRRIQ3A6PVS8 624 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 NRP1O14786 923 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 PPEF2O14830 753 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 GALTP07902 379 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 TRIM49P0CI25 452 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 TRIM49CP0CI26 452 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 EPB41P11171 864 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 CTNNB1P35222 781 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 VAMP7P51809 220 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 DSC1Q08554 894 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 TUSC3Q13454 348 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 CCDC40Q4G0X9 1142 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 C1orf220Q5T0J3 134 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 SPATA1Q5VX52 437 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 KCNT2Q6UVM3 1135 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 FILIP1Q7Z7B0 1213 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 TMEM173Q86WV6 379 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 IRF2BP1Q8IU81 584 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 CD302Q8IX05 232 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 AOPEPQ8N6M6 819 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 PARD3BQ8TEW8 1205 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 HASPINQ8TF76 798 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 BCL7CQ8WUZ0 217 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 BORCS6Q96GS4 357 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 CEP63Q96MT8 703 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 FNBP1Q96RU3 617 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 MTMR12Q9C0I1 747 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 MMRN2Q9H8L6 949 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 SLC28A3Q9HAS3 691 aa14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 SAMSN1Q9NSI8 373 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-212ENST00000504380 NLRC5Q86WI3 1866 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 EPOPA6NHQ4 379 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 RFXAPO00287 272 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 CSPG5O95196 566 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 ALDH2P05091 517 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 KRT13P13646 458 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 LAG3P18627 525 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms