RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 TBC1D4O60343 1298 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 ADRB2P07550 413 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 UBA7P41226 1012 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 OSTNP61366 133 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 NOLC1Q14978 699 aaKnown RBP eCLIP15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 SEZ6Q53EL9 994 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 DCLRE1AQ6PJP8 1040 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 CYP26C1Q6V0L0 522 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 HAUS6Q7Z4H7 955 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 PALB2Q86YC2 1186 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 KREMEN2Q8NCW0 462 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 SNX21Q969T3 373 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 C18orf25Q96B23 403 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 DDX27Q96GQ7 796 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 UROC1Q96N76 676 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 USP28Q96RU2 1077 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 CCDC94Q9BW85 323 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 STRA6Q9BX79 667 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 PLEKHA4Q9H4M7 779 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 WDR6Q9NNW5 1121 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 MTRRQ9UBK8 725 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 TTC26A0AVF1 554 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 PPP1R37O75864 691 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 ASGR2P07307 311 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 MYBP10242 640 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 MARCKSP29966 332 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 DDIT3P35638 169 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 BRCC3P46736 316 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 CREMQ03060 361 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 ELAVL2Q12926 359 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 ZBTB6Q15916 424 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 PSMD5Q16401 504 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 ZBTB41Q5SVQ8 909 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 GLYCTKQ8IVS8 523 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 TDRD5Q8NAT2 981 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 TMEM87AQ8NBN3 555 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 CDK5RAP3Q96JB5 506 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 ACAP3Q96P50 834 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 ZDHHC7Q9NXF8 308 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 LARSQ9P2J5 1176 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 TBX20Q9UMR3 447 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 SORCS3Q9UPU3 1222 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 HCN4Q9Y3Q4 1203 aa15.31■□□□□ 0.04
PDLIM7-211ENST00000504318 I3L4J1 428 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 CLUHO75153 1309 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 ZMYND10O75800 440 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 B3GAT3O94766 335 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 PDGFBP01127 241 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 TKTP29401 623 aaKnown RBP15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 TNFSF9P41273 254 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 NASPP49321 788 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 TSC2P49815 1807 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 SMTNP53814 917 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 GTF2BQ00403 316 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 RAB33AQ14088 237 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 MRPL58Q14197 206 aaKnown RBP15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 CCDC149Q6ZUS6 474 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 DNAJC19Q96DA6 116 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 PRKD2Q9BZL6 878 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 ST6GALNAC4Q9H4F1 302 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 PARVGQ9HBI0 331 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 TOPORSQ9NS56 1045 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 ANKFY1Q9P2R3 1169 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 LIMD1Q9UGP4 676 aa15.3■□□□□ 0.04
PDLIM7-211ENST00000504318 PODXLO00592 558 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 STX6O43752 255 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 TRAK2O60296 914 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 CXCL8P10145 99 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 YARSP54577 528 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 STRN3Q13033 797 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 SLC39A14Q15043 492 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 CEP57Q86XR8 500 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 MAP4K3Q8IVH8 894 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 PLCD3Q8N3E9 789 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 MYADMQ96S97 322 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 IKZF4Q9H2S9 585 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 EPS15L1Q9UBC2 864 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 TUBGCP4Q9UGJ1 667 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 BACE2Q9Y5Z0 518 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 STYXL1Q9Y6J8 313 aa15.29■□□□□ 0.04
PDLIM7-211ENST00000504318 CACNA1HO95180 2353 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 SCN1AP35498 2009 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 A0A0B4J269 797 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 FRMD3A2A2Y4 597 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 MYMKA6NI61 221 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 TISP43B9A030 160 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 H0YCG3 227 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 POU2F2P09086 479 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 HARSP12081 509 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 LRPAP1P30533 357 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 HOXA9P31269 272 aa15.28■□□□□ 0.04
PDLIM7-211ENST00000504318 AARSP49588 968 aaKnown RBP eCLIP15.28■□□□□ 0.044e-9■■□□□ 11.9
PDLIM7-211ENST00000504318 MTMR3Q13615 1198 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms