RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 C8orf33Q9H7E9 229 aaPredicted RBP14□□□□□ -0.17
LSM6-204ENST00000504181 COL4A3BPQ9Y5P4 624 aa14□□□□□ -0.17
LSM6-204ENST00000504181 HECTD1Q9ULT8 2610 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 PATE3B3GLJ2 98 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 E7EWF7 191 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 KHNYNO15037 678 aaKnown RBP13.99□□□□□ -0.17
LSM6-204ENST00000504181 DCLK1O15075 740 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 RHOBTB1O94844 696 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 KIF4AO95239 1232 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 LRG1P02750 347 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 SRGAP2CP0DJJ0 459 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 CTHP32929 405 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 MLLT6P55198 1093 aaPredicted RBP13.99□□□□□ -0.17
LSM6-204ENST00000504181 SIM1P81133 766 aaPredicted RBP13.99□□□□□ -0.17
LSM6-204ENST00000504181 GRIK3Q13003 919 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 CCINQ13939 588 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 NFXL1Q6ZNB6 911 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 MFSD6LQ8IWD5 586 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 GSTCDQ8NEC7 633 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 CPB2Q96IY4 423 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 NIFKQ9BYG3 293 aaKnown RBP13.99□□□□□ -0.17
LSM6-204ENST00000504181 NXF3Q9H4D5 531 aaKnown RBP13.99□□□□□ -0.17
LSM6-204ENST00000504181 SLC32A1Q9H598 525 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 KLK14Q9P0G3 267 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 SLC8A2Q9UPR5 921 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 CDY1Q9Y6F8 540 aa13.99□□□□□ -0.17
LSM6-204ENST00000504181 DENND4CQ5VZ89 1909 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 MYBPHLA2RUH7 354 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 SMCO2A6NFE2 343 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 CASTOR2A6NHX0 329 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 HEPACAM2A8MVW5 462 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 MAFO75444 373 aaPredicted RBP13.98□□□□□ -0.17
LSM6-204ENST00000504181 ERLIN2O94905 339 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 CYP3A4P08684 503 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 AKAP5P24588 427 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 PRR16Q569H4 304 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 PPP1R18Q6NYC8 613 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 PDXDC1Q6P996 788 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 TMTC3Q6ZXV5 915 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 PDZD4Q76G19 769 aaPredicted RBP13.98□□□□□ -0.17
LSM6-204ENST00000504181 SRGAP1Q7Z6B7 1085 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 YAF2Q8IY57 180 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 ZSCAN18Q8TBC5 510 aaPredicted RBP13.98□□□□□ -0.17
LSM6-204ENST00000504181 CRYGNQ8WXF5 182 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
LSM6-204ENST00000504181 URB1O60287 2271 aaKnown RBP13.98□□□□□ -0.17
LSM6-204ENST00000504181 FAM221BA6H8Z2 402 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 CCDC69A6NI79 296 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 ZNF197O14709 1029 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 GJA1P17302 382 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 XKR3Q5GH77 459 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 LARP1BQ659C4 914 aaKnown RBP13.97□□□□□ -0.17
LSM6-204ENST00000504181 RTL10Q7L3V2 364 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 MB21D2Q8IYB1 491 aaPredicted RBP13.97□□□□□ -0.17
LSM6-204ENST00000504181 SYNPOQ8N3V7 929 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 UNC45AQ9H3U1 944 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 POLR3BQ9NW08 1133 aaPredicted RBP13.97□□□□□ -0.17
LSM6-204ENST00000504181 ZNF462Q96JM2 2506 aa13.97□□□□□ -0.17
LSM6-204ENST00000504181 CNTNAP5Q8WYK1 1306 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 DDX11L8A8MPP1 907 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 HIP1O00291 1037 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 CHADO15335 359 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 C1QL1O75973 258 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 STBD1O95210 358 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 PLA2G2AP14555 144 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 JAK3P52333 1124 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 IRX4P78413 519 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 NOTUMQ6P988 496 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
LSM6-204ENST00000504181 HS6ST3Q8IZP7 471 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 RSPRY1Q96DX4 576 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 HHIPQ96QV1 700 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 TRIM6Q9C030 488 aaPredicted RBP13.96□□□□□ -0.17
LSM6-204ENST00000504181 CCDC86Q9H6F5 360 aaKnown RBP13.96□□□□□ -0.17
LSM6-204ENST00000504181 SNTG2Q9NY99 539 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 GTSE1Q9NYZ3 720 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 MTRRQ9UBK8 725 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 RAXQ9Y2V3 346 aa13.96□□□□□ -0.17
LSM6-204ENST00000504181 GON4LQ3T8J9 2241 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 ARHGEF37A1IGU5 675 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 H0Y626 953 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 PRRG1O14668 218 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 TSPAN1O60635 241 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 MICAL2O94851 1124 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 TRIM16O95361 564 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 SFNP31947 248 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 GBP1P32455 592 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 RDXP35241 583 aaKnown RBP13.95□□□□□ -0.18
LSM6-204ENST00000504181 SPIRE1Q08AE8 756 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 TUSC3Q13454 348 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 CASC1Q6TDU7 716 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 GPIHBP1Q8IV16 184 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 TEX2Q8IWB9 1127 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 MDM1Q8TC05 714 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 PRPF31Q8WWY3 499 aaKnown RBP13.95□□□□□ -0.18
LSM6-204ENST00000504181 GJA10Q969M2 543 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 CRELD1Q96HD1 420 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 ZFYVE19Q96K21 471 aa13.95□□□□□ -0.18
LSM6-204ENST00000504181 CSRNP2Q9H175 543 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms