RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 NHLH1Q02575 133 aa24.12■■□□□ 1.45
LSM6-203ENST00000503982 NOLC1Q14978 699 aaKnown RBP eCLIP24.12■■□□□ 1.45
LSM6-203ENST00000503982 IER5LQ5T953 404 aa24.12■■□□□ 1.45
LSM6-203ENST00000503982 LILRA6Q6PI73 481 aa24.12■■□□□ 1.45
LSM6-203ENST00000503982 ALYREFQ86V81 257 aaKnown RBP24.12■■□□□ 1.45
LSM6-203ENST00000503982 PTPRHQ9HD43 1115 aa24.12■■□□□ 1.45
LSM6-203ENST00000503982 FBXL21Q9UKT6 434 aa24.12■■□□□ 1.45
LSM6-203ENST00000503982 PDCD11Q14690 1871 aaKnown RBP24.12■■□□□ 1.45
LSM6-203ENST00000503982 TMEM189-UBE2V1I3L0A0 370 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 I3L4J1 428 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 PODXLO00592 558 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 C1RP00736 705 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 OR1D2P34982 312 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 BRCC3P46736 316 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 TDGQ13569 410 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 SEZ6Q53EL9 994 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 MYCT1Q8N699 235 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 TMEM161BQ8NDZ6 487 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 ZNF707Q96C28 371 aaPredicted RBP24.11■■□□□ 1.45
LSM6-203ENST00000503982 DDX27Q96GQ7 796 aaKnown RBP24.11■■□□□ 1.45
LSM6-203ENST00000503982 SNX27Q96L92 541 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 KCNK12Q9HB15 430 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 FBXW11Q9UKB1 542 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 NUB1Q9Y5A7 615 aa24.11■■□□□ 1.45
LSM6-203ENST00000503982 K7ENM7 598 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 CLDN3O15551 220 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 SLC26A4O43511 780 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 TOM1L1O75674 476 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 C8AP07357 584 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 MAPTP10636 758 aaKnown RBP24.1■■□□□ 1.45
LSM6-203ENST00000503982 TKTP29401 623 aaKnown RBP24.1■■□□□ 1.45
LSM6-203ENST00000503982 AVPR2P30518 371 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 HOXD11P31277 338 aaPredicted RBP24.1■■□□□ 1.45
LSM6-203ENST00000503982 LONP1P36776 959 aaKnown RBP24.1■■□□□ 1.45
LSM6-203ENST00000503982 PTPN5P54829 565 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 MCM6Q14566 821 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 KARSQ15046 597 aaKnown RBP24.1■■□□□ 1.45
LSM6-203ENST00000503982 UPP1Q16831 310 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 PRSS33Q8NF86 280 aa24.1■■□□□ 1.45
LSM6-203ENST00000503982 NTPCRQ9BSD7 190 aaKnown RBP24.1■■□□□ 1.45
LSM6-203ENST00000503982 K7ELQ4 463 aaPredicted RBP24.09■■□□□ 1.45
LSM6-203ENST00000503982 TBCAO75347 108 aaKnown RBP24.09■■□□□ 1.45
LSM6-203ENST00000503982 PLCG1P19174 1290 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 FGFR3P22607 806 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 RFX1P22670 979 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 PROZP22891 400 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 LIG4P49917 911 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 SOX4Q06945 474 aaPredicted RBP24.09■■□□□ 1.45
LSM6-203ENST00000503982 INTS4Q96HW7 963 aaKnown RBP24.09■■□□□ 1.45
LSM6-203ENST00000503982 MYADMQ96S97 322 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 REEP2Q9BRK0 252 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 RHOBTB2Q9BYZ6 727 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 FOXD4L1Q9NU39 408 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 IGSF9Q9P2J2 1179 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 ODF2LQ9ULJ1 636 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 CDY1Q9Y6F8 540 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 DOCK6Q96HP0 2047 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 ZDBF2Q9HCK1 2354 aa24.09■■□□□ 1.45
LSM6-203ENST00000503982 CCL16O15467 120 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 ADAM12O43184 909 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 XYLBO75191 536 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 IGFBP6P24592 240 aaPredicted RBP24.08■■□□□ 1.45
LSM6-203ENST00000503982 GRIN1Q05586 938 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 ARSHQ5FYA8 562 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 ZPBP2Q6X784 338 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 ANKS3Q6ZW76 656 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 HAUS6Q7Z4H7 955 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 GRASPQ7Z6J2 395 aaPredicted RBP24.08■■□□□ 1.45
LSM6-203ENST00000503982 C3orf58Q8NDZ4 430 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 FLCNQ8NFG4 579 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 SLC7A14Q8TBB6 771 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 C18orf25Q96B23 403 aaPredicted RBP24.08■■□□□ 1.45
LSM6-203ENST00000503982 ZMAT2Q96NC0 199 aaKnown RBP24.08■■□□□ 1.45
LSM6-203ENST00000503982 MTRRQ9UBK8 725 aa24.08■■□□□ 1.45
LSM6-203ENST00000503982 DOCK8Q8NF50 2099 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 STK25O00506 426 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 N4BP1O75113 896 aaKnown RBP24.07■■□□□ 1.44
LSM6-203ENST00000503982 FSHRP23945 695 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 MCM4P33991 863 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 NCKAP1LP55160 1127 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 ARPP19P56211 112 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 AXDND1Q5T1B0 1012 aaPredicted RBP24.07■■□□□ 1.44
LSM6-203ENST00000503982 ALKAL1Q6UXT8 129 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 RSAD2Q8WXG1 361 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 RAD54LQ92698 747 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 PARVGQ9HBI0 331 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 CNTN3Q9P232 1028 aa24.07■■□□□ 1.44
LSM6-203ENST00000503982 HNRNPA1P09651 372 aaKnown RBP eCLIP24.06■■□□□ 1.44
LSM6-203ENST00000503982 CXCL8P10145 99 aa24.06■■□□□ 1.44
LSM6-203ENST00000503982 KCNE1P15382 129 aa24.06■■□□□ 1.44
LSM6-203ENST00000503982 MARCKSP29966 332 aaPredicted RBP24.06■■□□□ 1.44
LSM6-203ENST00000503982 ELF1P32519 619 aa24.06■■□□□ 1.44
LSM6-203ENST00000503982 CEBPZQ03701 1054 aaKnown RBP24.06■■□□□ 1.44
LSM6-203ENST00000503982 XKR4Q5GH76 650 aa24.06■■□□□ 1.44
LSM6-203ENST00000503982 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.06■■□□□ 1.44
LSM6-203ENST00000503982 CCDC39Q9UFE4 941 aa24.06■■□□□ 1.44
LSM6-203ENST00000503982 DUSP12Q9UNI6 340 aa24.06■■□□□ 1.44
LSM6-203ENST00000503982 CLIC4Q9Y696 253 aa24.06■■□□□ 1.44
LSM6-203ENST00000503982 ABLIM1O14639 778 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 HNRNPDLO14979 420 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms