RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 IFT122Q9HBG6 1241 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 RNF216Q9NWF9 866 aaPredicted RBP22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 COG5Q9UP83 839 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 INO80B-WBP1J3KQ70 363 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 ERLIN1O75477 346 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 ATF7IP2Q5U623 682 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 IQSEC1Q6DN90 963 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 SPOPLQ6IQ16 392 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 RASAL3Q86YV0 1011 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 HES6Q96HZ4 224 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 INO80BQ9C086 356 aaPredicted RBP22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 NMRK2Q9NPI5 230 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 CPA4Q9UI42 421 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 H3BRB1 525 aa22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 B4GALT5O43286 388 aa22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 IQCF3P0C7M6 154 aa22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 KRT5P13647 590 aa22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 ACO1P21399 889 aaKnown RBP22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 GPC5P78333 572 aa22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 FAM187BQ17R55 369 aa22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 MORN1Q5T089 497 aa22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 TUT1Q9H6E5 874 aaKnown RBP22.93■■□□□ 1.26
UBE2D3-216ENST00000503742 IGF2BP3O00425 579 aaKnown RBP eCLIP22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 KCNK3O14649 394 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 MMP3P08254 477 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 MCM3P25205 808 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 CUL2Q13617 745 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 SURF1Q15526 300 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 FUT8Q9BYC5 575 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 RBM12Q9NTZ6 932 aaKnown RBP22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 TNFSF13BQ9Y275 285 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 ADCY6O43306 1168 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 SASH3O75995 380 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 CLTAP09496 248 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 NCOA4Q13772 614 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 EEF1DP3Q658K8 133 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 ZCCHC17Q9NP64 241 aaKnown RBP22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 PRMT7Q9NVM4 692 aaPredicted RBP22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 SLC5A4Q9NY91 659 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 AMFRQ9UKV5 643 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 ZHX1Q9UKY1 873 aaPredicted RBP22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 DOCK3Q8IZD9 2030 aa22.92■■□□□ 1.26
UBE2D3-216ENST00000503742 MTA2O94776 668 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 PHKA2P46019 1235 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 NOP14P78316 857 aaKnown RBP22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 MTHFD1LQ6UB35 978 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 ZNF677Q86XU0 584 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 OR6J1Q8NGC5 347 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 ACTRT1Q8TDG2 376 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 LRRC1Q9BTT6 524 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 L1RE1Q9UN81 338 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 CNTN6Q9UQ52 1028 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 NUB1Q9Y5A7 615 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 PCDHB2Q9Y5E7 798 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 ANK1P16157 1881 aa22.91■■□□□ 1.26
UBE2D3-216ENST00000503742 TBXAS1P24557 533 aaPredicted RBP22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 BPIFB4P59827 614 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 IRF5Q13568 498 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 AMHR2Q16671 573 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 PTPROQ16827 1216 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 ZNF568Q3ZCX4 644 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 SCARA3Q6AZY7 606 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 CCDC70Q6NSX1 233 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 USP38Q8NB14 1042 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 RUBCNQ92622 972 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 CDT1Q9H211 546 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 TMEM59LQ9UK28 342 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 FAM170AA1A519 330 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 MANSC4A6NHS7 340 aaPredicted RBP22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 PHACTR2O75167 634 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 HOXC6P09630 235 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 CLEC16AQ2KHT3 1053 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 PKNOX2Q96KN3 472 aa22.9■■□□□ 1.26
UBE2D3-216ENST00000503742 A0A087WZ62 844 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 ASS1P00966 412 aaKnown RBP22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 CST3P01034 146 aaPredicted RBP22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 CYP1A2P05177 515 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 TMOD1P28289 359 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 ZNF157P51786 506 aaPredicted RBP22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 MAP2K5Q13163 448 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 DGKDQ16760 1214 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 DUOXA2Q1HG44 320 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 MARCH8Q5T0T0 291 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 ACAD10Q6JQN1 1059 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 C11orf63Q6NUN7 778 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 RASGEF1CQ8N431 466 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 FDXACB1Q9BRP7 624 aaPredicted RBP22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 SELENOOQ9BVL4 669 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 MTMR12Q9C0I1 747 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 CTTNBP2NLQ9P2B4 639 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 GTF3C4Q9UKN8 822 aa22.89■■□□□ 1.26
UBE2D3-216ENST00000503742 MAP2K7O14733 419 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 B4GALT4O60513 344 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 CALCAP01258 141 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 UNGP13051 313 aaPredicted RBP22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 CBX1P83916 185 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 PPFIA1Q13136 1202 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 CHADLQ6NUI6 762 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 THNSL1Q8IYQ7 743 aa22.89■■□□□ 1.25
UBE2D3-216ENST00000503742 KRT222Q8N1A0 295 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms