RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 WHAMMQ8TF30 809 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 SPATA33Q96N06 139 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 MROH8Q9H579 483 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 IGKV6-21A0A0C4DH24 114 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 CLDN3O15551 220 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 SRGAP2CP0DJJ0 459 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 UNGP13051 313 aaPredicted RBP24.11■■□□□ 1.45
PCDH1-204ENST00000503492 ACO1P21399 889 aaKnown RBP24.11■■□□□ 1.45
PCDH1-204ENST00000503492 PEX5P50542 639 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 EFNA5P52803 228 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 ALS2CLQ60I27 953 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 ARMC9Q7Z3E5 817 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 ADAT2Q7Z6V5 191 aaKnown RBP24.11■■□□□ 1.45
PCDH1-204ENST00000503492 DDX42Q86XP3 938 aaKnown RBP eCLIP24.11■■□□□ 1.45
PCDH1-204ENST00000503492 UBL4BQ8N7F7 174 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 EIF1ADQ8N9N8 165 aaKnown RBP24.11■■□□□ 1.45
PCDH1-204ENST00000503492 MORC4Q8TE76 937 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 CD101Q93033 1021 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 PCDHB2Q9Y5E7 798 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 ERICH4A6NGS2 130 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 TTI1O43156 1089 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 TNFSF9P41273 254 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 CDCA2Q69YH5 1023 aaPredicted RBP24.1■■□□□ 1.45
PCDH1-204ENST00000503492 SCARA3Q6AZY7 606 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 MREGQ8N565 214 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 CCDC26Q8TAB7 109 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 CELF4Q9BZC1 486 aaKnown RBP24.1■■□□□ 1.45
PCDH1-204ENST00000503492 ERVK-5Q9HDB9 667 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 UVRAGQ9P2Y5 699 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 CNOT8Q9UFF9 292 aaKnown RBP24.1■■□□□ 1.45
PCDH1-204ENST00000503492 ZHX1Q9UKY1 873 aaPredicted RBP24.1■■□□□ 1.45
PCDH1-204ENST00000503492 FAM189A1O60320 539 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 LMAN1P49257 510 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 CUL1Q13616 776 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 CUL2Q13617 745 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 MAATS1Q7Z4T9 603 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 ZBTB33Q86T24 672 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 RNF149Q8NC42 400 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 TCP11Q8WWU5 503 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 NAP1L3Q99457 506 aaPredicted RBP24.1■■□□□ 1.45
PCDH1-204ENST00000503492 SH3GL2Q99962 352 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 MRPL4Q9BYD3 311 aaKnown RBP24.1■■□□□ 1.45
PCDH1-204ENST00000503492 PDGFCQ9NRA1 345 aa24.1■■□□□ 1.45
PCDH1-204ENST00000503492 HSF2BPO75031 334 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 PTENP60484 403 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 HLTFQ14527 1009 aaKnown RBP eCLIP24.09■■□□□ 1.45
PCDH1-204ENST00000503492 WNT8AQ9H1J5 351 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 TOM1L1O75674 476 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 TXNP10599 105 aaKnown RBP24.09■■□□□ 1.45
PCDH1-204ENST00000503492 MXD4Q14582 209 aaPredicted RBP24.09■■□□□ 1.45
PCDH1-204ENST00000503492 LDLRAD1Q5T700 205 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 ZNF677Q86XU0 584 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 BRSK2Q8IWQ3 736 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 TRAPPC12Q8WVT3 735 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.09■■□□□ 1.45
PCDH1-204ENST00000503492 ZIM3Q96PE6 472 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 ACO2Q99798 780 aaKnown RBP24.09■■□□□ 1.45
PCDH1-204ENST00000503492 EFCC1Q9HA90 598 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 NUB1Q9Y5A7 615 aa24.09■■□□□ 1.45
PCDH1-204ENST00000503492 UMODL1Q5DID0 1318 aa24.08■■□□□ 1.45
PCDH1-204ENST00000503492 GAS2O43903 313 aaKnown RBP24.08■■□□□ 1.45
PCDH1-204ENST00000503492 CYP2C8P10632 490 aa24.08■■□□□ 1.45
PCDH1-204ENST00000503492 BPIFB4P59827 614 aa24.08■■□□□ 1.45
PCDH1-204ENST00000503492 EAPPQ56P03 285 aaPredicted RBP24.08■■□□□ 1.45
PCDH1-204ENST00000503492 NEUROG2Q9H2A3 272 aa24.08■■□□□ 1.45
PCDH1-204ENST00000503492 CLSTN1O94985 981 aa24.08■■□□□ 1.44
PCDH1-204ENST00000503492 CLTAP09496 248 aa24.08■■□□□ 1.44
PCDH1-204ENST00000503492 MCOLN2Q8IZK6 566 aa24.08■■□□□ 1.44
PCDH1-204ENST00000503492 IQCKQ8N0W5 287 aa24.08■■□□□ 1.44
PCDH1-204ENST00000503492 CPA5Q8WXQ8 436 aa24.08■■□□□ 1.44
PCDH1-204ENST00000503492 PIK3R5Q8WYR1 880 aa24.08■■□□□ 1.44
PCDH1-204ENST00000503492 TCHPQ9BT92 498 aa24.08■■□□□ 1.44
PCDH1-204ENST00000503492 PRKCBP05771 671 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 NOP14P78316 857 aaKnown RBP24.07■■□□□ 1.44
PCDH1-204ENST00000503492 SNAPC2Q13487 334 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 SEC14L1Q92503 715 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 PCDHB4Q9Y5E5 795 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 ABLIM1O14639 778 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 DAPK3O43293 454 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 SPOPO43791 374 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 CTNNA1P35221 906 aaKnown RBP24.07■■□□□ 1.44
PCDH1-204ENST00000503492 NCOA4Q13772 614 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 CLUL1Q15846 466 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 ZBTB8OSQ8IWT0 167 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 SHCBP1Q8NEM2 672 aa24.07■■□□□ 1.44
PCDH1-204ENST00000503492 GOLGA6L10A0A0M3HER8 536 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 CYP1A1P04798 512 aaPredicted RBP24.06■■□□□ 1.44
PCDH1-204ENST00000503492 GJB1P08034 283 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 CFHP08603 1231 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 CTNNA2P26232 953 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 HSPA9P38646 679 aaKnown RBP24.06■■□□□ 1.44
PCDH1-204ENST00000503492 MAPK6Q16659 721 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 TMEM270Q6UE05 265 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 RHPN2Q8IUC4 686 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 EXOC8Q8IYI6 725 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 ZBTB10Q96DT7 871 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 ZNF668Q96K58 619 aaPredicted RBP24.06■■□□□ 1.44
PCDH1-204ENST00000503492 SMARCAD1Q9H4L7 1026 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 PCDHA3Q9Y5H8 950 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 OPA1O60313 960 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms