RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TMEM240Q5SV17 173 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 OR5B17Q8NGF7 314 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 RTN4Q9NQC3 1192 aaKnown RBP22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 INTS13Q9NVM9 706 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 LRFN2Q9ULH4 789 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 STX10O60499 249 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 FGFR1P11362 822 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 KCNE1P15382 129 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 MRE11P49959 708 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 NR1I3Q14994 352 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 DUOXA2Q1HG44 320 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 CBWD6Q4V339 395 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 CBWD3Q5JTY5 395 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 CBWD5Q5RIA9 395 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 KIF12Q96FN5 646 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 TRIM5Q9C035 493 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 XPO4Q9C0E2 1151 aaKnown RBP22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 C2CD2Q9Y426 696 aa22.08■■□□□ 1.13
CDC42SE2-206ENST00000503291 LGALS16A8MUM7 142 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 PTGESO14684 152 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 OFD1O75665 1012 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 GTF2H1P32780 548 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 FMO5P49326 533 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 WDR5P61964 334 aaKnown RBP22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 TMEM132DQ14C87 1099 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 PSRC1Q6PGN9 363 aaPredicted RBP22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 SV2AQ7L0J3 742 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 NPAS4Q8IUM7 802 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 TMEM117Q9H0C3 514 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 RNF216Q9NWF9 866 aaPredicted RBP22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 MIOSQ9NXC5 875 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 TEX33O43247 280 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 C4BPAP04003 597 aaKnown RBP22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 UBXN1Q04323 297 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 ZBTB6Q15916 424 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 CLLU1OSQ5K130 101 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 GLB1LQ6UWU2 654 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 NT5DC4Q86YG4 428 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 HELQQ8TDG4 1101 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 RPS6KC1Q96S38 1066 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 MTMR12Q9C0I1 747 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 TMEM8AQ9HCN3 771 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 PLAGL2Q9UPG8 496 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 DERAQ9Y315 318 aa22.07■■□□□ 1.12
CDC42SE2-206ENST00000503291 UPP2O95045 317 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 AMHP03971 560 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 TMEM191BP0C7N4 346 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 AP3M2P53677 418 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 KRT39Q6A163 491 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 CACTINQ8WUQ7 758 aaKnown RBP22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 TOP1MTQ969P6 601 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 TSPAN18Q96SJ8 248 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 INPP5FQ9Y2H2 1132 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 SCNN1GP51170 649 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 DEFB103AP81534 67 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 ANKRD36BP1Q96IX9 119 aa22.06■■□□□ 1.12
CDC42SE2-206ENST00000503291 RALGAPA2Q2PPJ7 1873 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 ZBBXA8MT70 800 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 CBFA2T2O43439 604 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 THP07101 528 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 KCNJ6P48051 423 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 MXI1P50539 228 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 ZACNQ401N2 412 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 FKBP15Q5T1M5 1219 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 TDRD10Q5VZ19 366 aaKnown RBP22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 C15orf39Q6ZRI6 1047 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 TRAPPC11Q7Z392 1133 aa22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 C18orf25Q96B23 403 aaPredicted RBP22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 PPP1R10Q96QC0 940 aaKnown RBP22.05■■□□□ 1.12
CDC42SE2-206ENST00000503291 INPPL1O15357 1258 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 POMCP01189 267 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 TNNC2P02585 160 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 BIRC3Q13489 604 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 ABI1Q8IZP0 508 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 UBQLN1Q9UMX0 589 aaKnown RBP22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 P4HA2O15460 535 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 HOXA2O43364 376 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 N4BP1O75113 896 aaKnown RBP22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 TPM3P06753 285 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 MAGEA10P43363 369 aaPredicted RBP22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 MYL7Q01449 175 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 PTPN21Q16825 1174 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 NOMO2Q5JPE7 1267 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 TMCO2Q7Z6W1 182 aaPredicted RBP22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 TMEM130Q8N3G9 435 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 HERVK_113Q902F9 699 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 CRACR2AQ9BSW2 395 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 DPP3Q9NY33 737 aa22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 CXXC1Q9P0U4 656 aaPredicted RBP22.04■■□□□ 1.12
CDC42SE2-206ENST00000503291 PMM2O15305 246 aa22.03■■□□□ 1.12
CDC42SE2-206ENST00000503291 GATMP50440 423 aa22.03■■□□□ 1.12
CDC42SE2-206ENST00000503291 GUCY2FP51841 1108 aa22.03■■□□□ 1.12
CDC42SE2-206ENST00000503291 SCARA3Q6AZY7 606 aa22.03■■□□□ 1.12
CDC42SE2-206ENST00000503291 C1orf127Q8N9H9 656 aa22.03■■□□□ 1.12
CDC42SE2-206ENST00000503291 BEST2Q8NFU1 509 aa22.03■■□□□ 1.12
CDC42SE2-206ENST00000503291 CASD1Q96PB1 797 aa22.03■■□□□ 1.12
CDC42SE2-206ENST00000503291 TUBGCP4Q9UGJ1 667 aa22.03■■□□□ 1.12
CDC42SE2-206ENST00000503291 PHACTR2O75167 634 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 CST3P01034 146 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms